Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0050
         (555 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7N9V3 Cluster: Glycosyltransferase sugar-binding regio...    32   7.8  
UniRef50_Q5CTC3 Cluster: Putative uncharacterized protein; n=3; ...    32   7.8  

>UniRef50_A7N9V3 Cluster: Glycosyltransferase sugar-binding region
           containing DXD motif family; n=9; Francisella
           tularensis|Rep: Glycosyltransferase sugar-binding region
           containing DXD motif family - Francisella tularensis
           subsp. holarctica FTA
          Length = 321

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +3

Query: 102 DLSQNEIYLTLRKRLEILFN-ESW*HVNIDIYRSILAMKYLIFYFCFEYEHF 254
           DL +N+I  T R   + +F  E+W  +N+  Y +++ MK L   F FEY ++
Sbjct: 47  DLQRNKI--TNRLEFKQIFELENWCQINLSNYLTLIQMKTLSETFMFEYPNY 96


>UniRef50_Q5CTC3 Cluster: Putative uncharacterized protein; n=3;
            Cryptosporidium|Rep: Putative uncharacterized protein -
            Cryptosporidium parvum Iowa II
          Length = 6579

 Score = 32.3 bits (70), Expect = 7.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -1

Query: 393  VCRRKVADVASATGDKLLYCSYLQLRNTRNTID 295
            +CR+K+  V    G  L YCSY    NT  T D
Sbjct: 4596 ICRQKINLVVYVNGSPLEYCSYPLFTNTHETTD 4628


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 469,361,192
Number of Sequences: 1657284
Number of extensions: 8459207
Number of successful extensions: 15878
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15876
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)