Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0050
         (555 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   2.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.1  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   4.1  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -3

Query: 178 TCYQLSLNK 152
           TCY+LSLNK
Sbjct: 310 TCYELSLNK 318


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = +2

Query: 2   LIIAFVCLYFFYFS 43
           ++I  +C+Y+FY++
Sbjct: 231 VLIILLCIYYFYYA 244



 Score = 21.8 bits (44), Expect = 4.1
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +2

Query: 5   IIAFVCLYFFYF 40
           ++  VC+Y+FY+
Sbjct: 252 LLLLVCIYYFYY 263



 Score = 20.6 bits (41), Expect = 9.5
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +2

Query: 8   IAFVCLYFFYFS 43
           I  +C+Y+FY++
Sbjct: 108 IILLCVYYFYYA 119


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 314 FLSCKYEQYSSLSPVALATSATFLL 388
           FLSC++ Q +S + +    SA  LL
Sbjct: 82  FLSCRFHQGASYNTLNTCRSALALL 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,304
Number of Sequences: 336
Number of extensions: 2482
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)