Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0048
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   3.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   3.4  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   7.9  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.9  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.9  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 487 LLFSLYQVLPVLKQMLH*YHHLLVVYWIGMLNIQR 591
           LLF L Q+   L+QM +    +   +  G L IQR
Sbjct: 299 LLFILIQLFNSLRQMKNNLERIYFYWSFGFLIIQR 333


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = -2

Query: 277 FLIFHTQKHTQHIQSFSHLFFNGASIILSIFNSFIKNVLILFHTSSREY*AWICSSICRL 98
           F++     HT     F  +F+    I+L +  + +  V  LF+ S R   + +C+   + 
Sbjct: 166 FVLLIGDLHTSIYIIFFDMFYQHHKIVLDMGKNCVTYVFDLFYLSKRA--SDLCNEANKT 223

Query: 97  -IFFHGLKI 74
            I   GLKI
Sbjct: 224 KILLVGLKI 232


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 257 KAHSAYPKFQPLVLQWSFHYPFHI 186
           +    Y +FQ L L+  FH+  ++
Sbjct: 8   RGRQTYTRFQTLELEKEFHFNHYL 31


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 257 KAHSAYPKFQPLVLQWSFHYPFHI 186
           +    Y +FQ L L+  FH+  ++
Sbjct: 159 RGRQTYTRFQTLELEKEFHFNHYL 182


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 257 KAHSAYPKFQPLVLQWSFHYPFHI 186
           +    Y +FQ L L+  FH+  ++
Sbjct: 218 RGRQTYTRFQTLELEKEFHFNHYL 241


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,649
Number of Sequences: 336
Number of extensions: 4842
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)