Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0047
(284 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0350 + 2534422-2535615 31 0.19
12_02_0407 - 18654134-18654172,18654913-18655803 30 0.33
12_02_0969 - 24936399-24936699,24936779-24936949,24937032-249378... 29 0.76
02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921... 29 0.76
12_02_0096 - 13573612-13573632,13573846-13573884,13574160-135744... 28 1.3
12_01_0801 + 7351171-7351198,7351383-7352020,7352098-7352559,735... 27 2.3
06_03_0262 + 18905352-18905481,18905570-18906003,18906082-189063... 27 2.3
06_02_0270 - 13613853-13614153,13614233-13614403,13614486-136153... 27 2.3
05_03_0466 - 14362190-14362312,14362411-14362658,14363289-14363664 27 2.3
03_05_0088 + 20664580-20664696,20664796-20665218,20665297-206655... 27 2.3
02_03_0337 + 17898732-17899370,17899516-17899977,17900058-179006... 27 2.3
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575... 27 3.1
03_04_0008 - 16274158-16274458,16274791-16275623,16275706-162761... 27 3.1
02_02_0590 - 11894721-11895188,11895684-11895851 27 3.1
11_05_0087 + 18970741-18972702 26 4.1
04_03_0789 + 19660713-19660896,19661405-19662027 26 4.1
03_01_0563 + 4169144-4169516,4170362-4170648,4171339-4171576,417... 26 4.1
01_06_0456 + 29521282-29522064 26 4.1
10_08_0888 - 21317163-21317687,21318044-21318153,21318258-21318408 26 5.4
07_03_0436 - 18188221-18188373,18189121-18189233,18189817-181898... 26 5.4
04_04_0964 - 29749624-29749649,29749742-29749945,29750036-297506... 26 5.4
04_03_0473 - 16332870-16332947,16333013-16333474,16333615-163337... 26 5.4
04_01_0324 - 4305017-4305271,4305353-4305814,4305870-4306340 26 5.4
01_06_1389 - 36969414-36969436,36970027-36970394,36970474-369706... 26 5.4
11_04_0042 + 12696247-12696299,12696855-12696940,12697359-126974... 25 7.1
10_08_0919 + 21564245-21565699,21566876-21567022,21567170-215672... 25 7.1
09_04_0097 - 14573499-14574110,14574977-14575017,14575424-145756... 25 7.1
09_02_0409 - 8656136-8656318,8656469-8656609,8658608-8658756,865... 25 7.1
09_02_0330 + 7321031-7321231,7321313-7321434,7321461-7322135,732... 25 7.1
07_01_0943 - 7959813-7960113,7960193-7960363,7960446-7961278,796... 25 7.1
04_03_0574 - 17338777-17339077,17339390-17340222,17340304-173407... 25 7.1
04_03_0205 + 12649724-12650191,12651493-12652025,12652114-126522... 25 7.1
01_05_0596 + 23511148-23512650 25 7.1
01_05_0408 + 21888898-21890181,21891289-21891984,21892167-21893705 25 7.1
01_03_0258 + 14309549-14309926 25 7.1
10_08_0887 - 21311301-21311828,21312001-21312110,21312215-21312392 25 9.4
07_03_0845 - 21979581-21981281 25 9.4
07_01_0523 - 3879550-3880134,3880313-3880491,3881519-3882383 25 9.4
06_01_1180 + 10141850-10141959,10142096-10142621 25 9.4
05_05_0143 + 22675463-22675592,22676227-22676414,22676492-226766... 25 9.4
04_04_0899 - 29229812-29229929,29230009-29230179,29230262-292310... 25 9.4
02_05_0820 + 32017814-32017961,32018046-32018281,32018847-320189... 25 9.4
01_06_0293 - 28254673-28254878,28255189-28255306,28255767-282559... 25 9.4
>06_01_0350 + 2534422-2535615
Length = 397
Score = 30.7 bits (66), Expect = 0.19
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 170 PWNSNAQAEKKTLPGPLGGVFRP 102
PW S+A+ E+K LP PL +F P
Sbjct: 42 PWRSSARLERKLLPPPLPWLFLP 64
>12_02_0407 - 18654134-18654172,18654913-18655803
Length = 309
Score = 29.9 bits (64), Expect = 0.33
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 27 EPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFCLSVRVPWNPIEGRY 191
E G+G ++++ PS+ +T P+ P R + CLS ++PI GRY
Sbjct: 115 EEGTGRLTLVNPSTGETLAVPPPPRLPPKRRHRRAPLVVSCLS--FGYHPITGRY 167
>12_02_0969 -
24936399-24936699,24936779-24936949,24937032-24937852,
24937946-24938407,24938486-24938890
Length = 719
Score = 28.7 bits (61), Expect = 0.76
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 273 VHPSPEFQGPQRVSGHRRKCGALRVP 196
VHP+P Q S HR C ++ VP
Sbjct: 248 VHPTPRAQHDTNPSHHRSSCASIEVP 273
>02_02_0346 -
9214365-9214583,9214830-9214919,9215012-9215177,
9215601-9215911,9215944-9216566,9216779-9216968,
9217096-9217197,9217285-9217425,9217815-9218411,
9219126-9219286,9220709-9220824,9221538-9221654,
9221746-9221808,9221879-9221949
Length = 988
Score = 28.7 bits (61), Expect = 0.76
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = -2
Query: 235 IRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGT 56
I+ P M S + + GFHG L+ KL PDL + HF LVF G
Sbjct: 188 IKLYPHM--SGEQKRLIEGAGFHGLVDLKCS-KLRPDLCSWLMEHFNPATNQLVFPGRGA 244
Query: 55 I 53
I
Sbjct: 245 I 245
>12_02_0096 -
13573612-13573632,13573846-13573884,13574160-13574493,
13574660-13574830,13574913-13575730,13575812-13576114,
13576352-13577085,13577174-13577303
Length = 849
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 273 VHPSPEFQGPQRVSGHRRKCGALRVP 196
VHP+P Q S HR C + +VP
Sbjct: 348 VHPTPRAQHDASPSQHRSSCASTKVP 373
>12_01_0801 +
7351171-7351198,7351383-7352020,7352098-7352559,
7352641-7353105
Length = 530
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 273 VHPSPEFQGPQRVSGHRRKCGALRVP 196
VHP+P Q S HR C + VP
Sbjct: 335 VHPTPRAQHDASPSQHRSSCASTEVP 360
>06_03_0262 +
18905352-18905481,18905570-18906003,18906082-18906303,
18906381-18906842,18906935-18907755,18907838-18908008,
18908088-18908347,18908453-18908508,18908786-18908824,
18909711-18909764
Length = 882
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 273 VHPSPEFQGPQRVSGHRRKCGALRVP 196
VHP+P Q S HR C + VP
Sbjct: 375 VHPTPRAQHDASPSQHRSSCSSTEVP 400
>06_02_0270 -
13613853-13614153,13614233-13614403,13614486-13615318,
13615401-13615746,13615940-13616127,13616238-13616408
Length = 669
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 273 VHPSPEFQGPQRVSGHRRKCGALRVP 196
VHP+P Q S HR C + VP
Sbjct: 194 VHPTPRAQHDTSPSQHRSSCASTEVP 219
>05_03_0466 - 14362190-14362312,14362411-14362658,14363289-14363664
Length = 248
Score = 27.1 bits (57), Expect = 2.3
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +3
Query: 6 GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFCLSVRVPWNPIEG 185
G V + PGSG V +IVP V G W R + F F + +E
Sbjct: 13 GCGVRVIVPGSGGVQVIVPGG--GGVHPGG-DWRRTTKSRRNR-FRFSARPEIKVAALEE 68
Query: 186 RYGS-EREEH 212
+GS E EEH
Sbjct: 69 EHGSGEEEEH 78
>03_05_0088 +
20664580-20664696,20664796-20665218,20665297-20665518,
20665597-20666058,20666140-20666300,20666422-20666973,
20667056-20667125,20667141-20667226,20667306-20667673,
20668002-20668018
Length = 825
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 273 VHPSPEFQGPQRVSGHRRKCGALRVP 196
VHP+P Q S HR C + VP
Sbjct: 367 VHPTPRAQHDASPSQHRSSCASTEVP 392
>02_03_0337 +
17898732-17899370,17899516-17899977,17900058-17900688,
17900819-17900888,17900971-17901141,17901221-17901479,
17901918-17901956,17902900-17902914
Length = 761
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 273 VHPSPEFQGPQRVSGHRRKCGALRVP 196
VHP+P Q S HR C + VP
Sbjct: 326 VHPTPRAQHDASPSQHRSSCASTEVP 351
>05_07_0112 - 27755604-27756449,27756624-27756887,27757428-27757532,
27757626-27758249,27759048-27759596,27759665-27760372,
27760449-27760658,27761266-27761421,27761524-27761664,
27762015-27762101,27762209-27762309,27763071-27763293,
27763384-27763548,27763621-27763713,27763801-27764292,
27764729-27764805,27765184-27765681,27765818-27766046
Length = 1855
Score = 26.6 bits (56), Expect = 3.1
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -1
Query: 170 PWNSNAQAEKKTLPGPLGGVFRPLWVTPSNTRF*RRGNDY*N-GSAAGFRNRNR 12
P + A+ +++T P G + W+TPSN R R G + G + G R+R+R
Sbjct: 1578 PRYTPAKTKQETEPMGTGFDRQETWLTPSNGRGGRGGRGRGSRGGSRGGRSRSR 1631
>03_04_0008 -
16274158-16274458,16274791-16275623,16275706-16276167,
16276245-16276882,16277068-16277197
Length = 787
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 273 VHPSPEFQGPQRVSGHRRKCGALRVP 196
VHP+P Q S HR C + VP
Sbjct: 369 VHPTPRAQYDASPSQHRSSCASTEVP 394
>02_02_0590 - 11894721-11895188,11895684-11895851
Length = 211
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 54 IVPSSLKTSVRRGNPKWPEDAAERSGKSFLFCL 152
++ S + V GN P +E+ G ++L CL
Sbjct: 70 VIQSPINLQVEHGNDLTPTSVSEKPGNNYLPCL 102
>11_05_0087 + 18970741-18972702
Length = 653
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 156 VRVPWNPIEGRYGSEREEHR 215
VR P P+ GR+G RE R
Sbjct: 56 VRAPRRPLHGRHGHHREHRR 75
>04_03_0789 + 19660713-19660896,19661405-19662027
Length = 268
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 6 GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAERSGK 134
G P P+P GSG+ + S+ S WP +ER K
Sbjct: 225 GPPSPMPSSGSGSATAAASSTTSAS---SPGAWPYGGSERKKK 264
>03_01_0563 +
4169144-4169516,4170362-4170648,4171339-4171576,
4172473-4172796,4172914-4172999,4173124-4173231,
4173315-4173619,4173733-4173960,4174109-4174877
Length = 905
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 241 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 143
+S R P R ++PYLPS G R LR+K
Sbjct: 205 QSTRELPTKRVFFSNKPYLPSETPPGLRELREK 237
>01_06_0456 + 29521282-29522064
Length = 260
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 157 TLRQKRKLFPDLSAASSGHFGLPRRTL 77
TLR+ ++FP +S++ G FG+ R L
Sbjct: 171 TLRRHHQVFPHISSSCQGCFGVRRYIL 197
>10_08_0888 -
21317163-21317687,21318044-21318153,21318258-21318408
Length = 261
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 47 NGSAAGFRNRNRIPF 3
NG A GF+N N+ PF
Sbjct: 50 NGGACGFKNTNQYPF 64
>07_03_0436 -
18188221-18188373,18189121-18189233,18189817-18189889,
18189979-18190046,18190132-18190372,18191614-18191732,
18192977-18193028,18193178-18193192
Length = 277
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 3 KGNPVPIPEPGSGTVSIIVPSSLKTSVRRGNP 98
+G+P+P+ P SG + S + RRG P
Sbjct: 160 RGSPMPVSSPWSGGALVENNDSSASRKRRGGP 191
>04_04_0964 -
29749624-29749649,29749742-29749945,29750036-29750634,
29750742-29750826,29750914-29751562,29751568-29751643,
29753891-29753957,29754097-29754998,29756579-29756790
Length = 939
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 181 SIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDE 62
S G H L K+ L+AASSG LP VF ++
Sbjct: 22 SRGCHHVNVLPMSGKIMLPLTAASSGSVALPCDAPVFTEK 61
>04_03_0473 -
16332870-16332947,16333013-16333474,16333615-16333739,
16333953-16334022
Length = 244
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 273 VHPSPEFQGPQRVSGHRRKCGALRVP 196
VHP P Q S HR C + VP
Sbjct: 178 VHPIPRAQHDASPSQHRSSCASTEVP 203
>04_01_0324 - 4305017-4305271,4305353-4305814,4305870-4306340
Length = 395
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 273 VHPSPEFQGPQRVSGHRRKCGALRVP 196
VHP+P Q S HR C VP
Sbjct: 270 VHPTPRAQHDASPSQHRSSCAFTEVP 295
>01_06_1389 -
36969414-36969436,36970027-36970394,36970474-36970644,
36970727-36971559,36971642-36972103,36972182-36972915,
36973004-36973133
Length = 906
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 273 VHPSPEFQGPQRVSGHRRKCGALRVP 196
+HP+P Q S HR C + VP
Sbjct: 401 MHPTPRAQHDPSPSQHRSSCASTEVP 426
>11_04_0042 +
12696247-12696299,12696855-12696940,12697359-12697439,
12697525-12697650,12697752-12697972,12698348-12698440,
12698713-12698853
Length = 266
Score = 25.4 bits (53), Expect = 7.1
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 169 HGTRTLRQK-RKLFPDLSAASSGHFGLPRRTLVFKDEGTIIETVPLPGSGI 20
HGT+ L+ RKL + SA G G RRT F DE + + P G+
Sbjct: 122 HGTKRLKSSSRKLKVEFSAKLGGPCGDNRRT--FVDEVVMYTRLRTPLIGV 170
>10_08_0919 +
21564245-21565699,21566876-21567022,21567170-21567286,
21567580-21568176
Length = 771
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 133 FPDLSAASSGHFGLPRRTLVFKDEGTIIETVPLPGSG 23
F L+ + +GLP +L T++E P PG G
Sbjct: 287 FSPLAVQTCRAYGLPLLSLQSHANATLVEQPPAPGLG 323
>09_04_0097 -
14573499-14574110,14574977-14575017,14575424-14575616,
14575697-14575837,14575970-14576197,14576297-14576552,
14576866-14577069,14577157-14577245,14577346-14577416,
14577498-14577579,14577653-14577715,14578018-14578155
Length = 705
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -3
Query: 279 LYVHPSPEFQGPQRVSGHRRKCGALRVPNH 190
+Y +P+P+F+G S RK + ++ H
Sbjct: 481 IYTYPAPDFRGKNHTSPVYRKLTSKQIVEH 510
>09_02_0409 -
8656136-8656318,8656469-8656609,8658608-8658756,
8658830-8658987,8659326-8659409,8659654-8659787,
8661255-8661389,8662159-8662551
Length = 458
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -1
Query: 221 ANAVLFAFRTISPFYRIPWNSNAQAEKKTLPGP 123
+ V F TIS +I W S KK+ P P
Sbjct: 264 SRGVAATFSTISSLSKIIWRSEPSPTKKSRPKP 296
>09_02_0330 +
7321031-7321231,7321313-7321434,7321461-7322135,
7322218-7322287,7322469-7322768
Length = 455
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 273 VHPSPEFQGPQRVSGHRRKCGALRVP 196
VHP+P Q S HR C + VP
Sbjct: 26 VHPTPCAQHDASPSQHRSSCASTEVP 51
>07_01_0943 -
7959813-7960113,7960193-7960363,7960446-7961278,
7961360-7961821,7961899-7962606
Length = 824
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 273 VHPSPEFQGPQRVSGHRRKCGALRV 199
VHP+P Q S HR C ++ V
Sbjct: 349 VHPTPRAQHDASPSQHRSSCASIEV 373
>04_03_0574 -
17338777-17339077,17339390-17340222,17340304-17340765,
17340843-17341030,17341244-17341576,17341665-17341796,
17342604-17342643
Length = 762
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 273 VHPSPEFQGPQRVSGHRRKCGALRVP 196
VHP+P Q S HR C + VP
Sbjct: 344 VHPTPCAQHDASPSQHRSSCASTEVP 369
>04_03_0205 +
12649724-12650191,12651493-12652025,12652114-12652239,
12652625-12652724,12652880-12652899,12653035-12653137,
12653213-12653351,12653448-12653662,12653772-12654320
Length = 750
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3
Query: 72 LKTRERLLKRFRCRV 28
L RERLLK FRC +
Sbjct: 488 LSMRERLLKEFRCSI 502
>01_05_0596 + 23511148-23512650
Length = 500
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 33 GSGTVSIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFCL 152
G + V ++ + RG+ +P + R G+SF +CL
Sbjct: 259 GHDNEGLFVAAAGLLGLGRGSLSFPSQISRRFGRSFSYCL 298
>01_05_0408 + 21888898-21890181,21891289-21891984,21892167-21893705
Length = 1172
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -3
Query: 282 HLYVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELER 154
H +H S P+R RR+CGAL + + D + + R
Sbjct: 21 HRLLHRSSLLPFPRRHHHRRRRCGALSIARASASAKDGVTVRR 63
>01_03_0258 + 14309549-14309926
Length = 125
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 123 RSGKSFLFCLSVRVPWNPIEGRYGSEREEHRICG 224
R G S++ + R P++ E RYG+ R+ + +CG
Sbjct: 42 RMGSSYVDDMRRRPPFS--EARYGAARKVYVVCG 73
>10_08_0887 - 21311301-21311828,21312001-21312110,21312215-21312392
Length = 271
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 47 NGSAAGFRNRNRIPF 3
NG A GF+N N+ PF
Sbjct: 59 NGGACGFKNVNQYPF 73
>07_03_0845 - 21979581-21981281
Length = 566
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 135 SFLFCLSVRVPWNPIEGRYGSEREEHRIC 221
+FL +++VP NP++ SE E IC
Sbjct: 362 AFLKIANIKVPGNPMQLNVQSEEECRSIC 390
>07_01_0523 - 3879550-3880134,3880313-3880491,3881519-3882383
Length = 542
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 24 PEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAERSG 131
P+P G ++VP + + R +W E A + G
Sbjct: 196 PDPEIGAARLLVPRAARERARGMAREWKEAAERKGG 231
>06_01_1180 + 10141850-10141959,10142096-10142621
Length = 211
Score = 25.0 bits (52), Expect = 9.4
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Frame = +3
Query: 9 NPVPIPEPGSGTVSIIVPSSLKTSVRRGNP---KWPEDAAERSGKSFLFCLSVRVP 167
+P P+ P PS S P + PE++A R G + LSV VP
Sbjct: 148 SPAPVTSPAPAPAQATNPSPSPDSKPDNQPAAEQPPENSASRGGMAAWSLLSVVVP 203
>05_05_0143 +
22675463-22675592,22676227-22676414,22676492-22676649,
22676656-22676953,22677035-22677867,22677950-22678120,
22678242-22678458,22678911-22678949,22679167-22679226
Length = 697
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 273 VHPSPEFQGPQRVSGHRRKCGALRVPN 193
VHP+P Q HR C + VP+
Sbjct: 217 VHPTPRAQHDASPLQHRSSCASTEVPS 243
>04_04_0899 -
29229812-29229929,29230009-29230179,29230262-29231094,
29231176-29231637,29231716-29232186
Length = 684
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 273 VHPSPEFQGPQRVSGHRRKCGALRVP 196
V P+P Q S HR C + +VP
Sbjct: 270 VQPTPRVQHDASPSQHRSSCASTKVP 295
>02_05_0820 +
32017814-32017961,32018046-32018281,32018847-32018951,
32019222-32019293,32019373-32019429
Length = 205
Score = 25.0 bits (52), Expect = 9.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 9 NPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAERSGKS 137
+PVP EP S + S +V + K K E AA +G S
Sbjct: 60 DPVPSEEPASASASTVVVTEDKPDPPPAEEKSEEVAAVSNGGS 102
>01_06_0293 - 28254673-28254878,28255189-28255306,28255767-28255961,
28256701-28256800,28256887-28256972,28257078-28257239,
28257965-28258101,28258233-28258281,28258688-28258746,
28258862-28258896,28259384-28259433,28260173-28260332,
28260898-28260963,28261065-28261162,28261649-28261696,
28262114-28262242,28262667-28262769,28262858-28262954,
28263181-28263241,28263659-28263740,28263845-28263962,
28264039-28266325
Length = 1481
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 157 TLRQKRKLFPDLSAASSGHFGLPRR 83
+LRQ+RK DL GHF L ++
Sbjct: 1105 SLRQRRKYIHDLFQEKPGHFELAQQ 1129
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,797,626
Number of Sequences: 37544
Number of extensions: 184620
Number of successful extensions: 668
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 291966432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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