Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0045
         (630 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1YRL7 Cluster: Cationic peptide CP8; n=3; Bombyx|Rep: ...   138   8e-32
UniRef50_A4LA63 Cluster: Cationic peptide CP8; n=1; Manduca sext...    81   3e-14
UniRef50_A7S1Y8 Cluster: Predicted protein; n=1; Nematostella ve...    35   1.4  
UniRef50_UPI00004DA303 Cluster: UPI00004DA303 related cluster; n...    35   1.9  
UniRef50_A4PBR1 Cluster: VC70-like protein-2; n=1; Halocynthia r...    34   3.2  
UniRef50_UPI0000E2282D Cluster: PREDICTED: mucin 6, gastric; n=1...    33   5.7  
UniRef50_UPI0000251DBE Cluster: mucin 6, gastric; n=2; Homo sapi...    33   5.7  
UniRef50_Q6W4X9 Cluster: Mucin-6 precursor; n=24; Tetrapoda|Rep:...    33   5.7  
UniRef50_P15188 Cluster: Orotidine 5'-phosphate decarboxylase; n...    33   7.5  
UniRef50_UPI0000E46265 Cluster: PREDICTED: similar to fibrillin ...    32   9.9  
UniRef50_Q9HFR4 Cluster: Autophagy-related protein 2; n=2; Fungi...    32   9.9  

>UniRef50_A1YRL7 Cluster: Cationic peptide CP8; n=3; Bombyx|Rep:
           Cationic peptide CP8 - Bombyx mandarina (Wild silk moth)
           (Wild silkworm)
          Length = 89

 Score =  138 bits (335), Expect = 8e-32
 Identities = 57/70 (81%), Positives = 60/70 (85%)
 Frame = +3

Query: 78  MRCVXAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGATCR 257
           MRC  AYGALVCGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLL EGATC+
Sbjct: 1   MRCAAAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLDEGATCK 60

Query: 258 FIRRN*AKPP 287
              +   + P
Sbjct: 61  IYSKELGETP 70



 Score = 66.1 bits (154), Expect = 7e-10
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +2

Query: 254 QIYSKELGETPSAVCKEPLKCIKRVCTKLV 343
           +IYSKELGETPSAVCKEPLKCIKRVCTKLV
Sbjct: 60  KIYSKELGETPSAVCKEPLKCIKRVCTKLV 89


>UniRef50_A4LA63 Cluster: Cationic peptide CP8; n=1; Manduca
           sexta|Rep: Cationic peptide CP8 - Manduca sexta (Tobacco
           hawkmoth) (Tobacco hornworm)
          Length = 105

 Score = 80.6 bits (190), Expect = 3e-14
 Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
 Frame = +3

Query: 96  YGALVCGTDYCEKNPCIQP--PLVCPKNTEHRARHAGKCACCPACVTLLGEGATCRFIRR 269
           YG LVCG++YC+++PC  P     C   + +RA+HAGKCACCPACVT+LGE A C+   +
Sbjct: 18  YGDLVCGSNYCKQHPCGSPIAQSSCRSPSVYRAKHAGKCACCPACVTMLGENAACKTYSK 77

Query: 270 N*AKPPPLCVR 302
              + P    R
Sbjct: 78  ELGETPSAICR 88



 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 19/27 (70%), Positives = 25/27 (92%)
 Frame = +2

Query: 260 YSKELGETPSAVCKEPLKCIKRVCTKL 340
           YSKELGETPSA+C++PLKC+  VCT++
Sbjct: 75  YSKELGETPSAICRDPLKCLNGVCTRV 101


>UniRef50_A7S1Y8 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 541

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +3

Query: 108 VCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKCACCPACV 227
           VCG+D     NPC+     C  N     +H GKC   P C+
Sbjct: 141 VCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGSSPRCM 181



 Score = 33.1 bits (72), Expect = 5.7
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
 Frame = +3

Query: 108 VCGTD-YCEKNPCIQPPLVCPKNTEHRARHAGKCA-----CCPAC 224
           VCG+D     NPC+    VC  N + R +H G C      C P C
Sbjct: 241 VCGSDGKTYDNPCVFKIAVCQMNGQLRLKHRGACGSRPDKCAPIC 285



 Score = 32.7 bits (71), Expect = 7.5
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +3

Query: 108 VCGTDYCE-KNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGEGA-TCRFI 263
           VCG+D     NPC+     C  N     +H GKC    +C     +G   C+ I
Sbjct: 292 VCGSDNVTYSNPCMLRSATCKSNGTITMKHRGKCGSSQSCEQKKCKGTKVCKMI 345


>UniRef50_UPI00004DA303 Cluster: UPI00004DA303 related cluster; n=2;
            Xenopus tropicalis|Rep: UPI00004DA303 UniRef100 entry -
            Xenopus tropicalis
          Length = 2690

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = +3

Query: 69   AGGMRCVX--AYGALVCGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGE 242
            AGG RC     Y +   G    + N C+Q P  C    ++ A  + KC C P    LLG+
Sbjct: 2362 AGGYRCTCPRGYRSQGVGRPCLDINECLQVPKPCAFECQNIAG-SYKCLCPPG-KQLLGD 2419

Query: 243  GATCRFIRR 269
            G +C  + R
Sbjct: 2420 GRSCAGLER 2428


>UniRef50_A4PBR1 Cluster: VC70-like protein-2; n=1; Halocynthia
           roretzi|Rep: VC70-like protein-2 - Halocynthia roretzi
           (Sea squirt)
          Length = 500

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
 Frame = +3

Query: 54  VDFYNAGGMRCVXAYGALVCGTDYCEK--NPCIQP-PLVCPKNTEHRARHAGKCACCPAC 224
           VDF N+   +CV   G      +YC    NP + P P VC  N        G C C P+C
Sbjct: 46  VDFGNSFQCQCVLG-GCTGLTCNYCPPPPNPTLPPRPEVCTPNPCR-----GDCYCTPSC 99

Query: 225 VTLLGE--GATCRFIRRN*AKPPPLCV 299
              LG    +   ++ +N   PPP+ V
Sbjct: 100 KHSLGYYCKSEAGYLGKNCTIPPPMLV 126


>UniRef50_UPI0000E2282D Cluster: PREDICTED: mucin 6, gastric; n=1;
           Pan troglodytes|Rep: PREDICTED: mucin 6, gastric - Pan
           troglodytes
          Length = 1034

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 207 HTFQRVWRDAQCS*-GKQVVAVCMDFFHSSLYHIPKHRTL*RNAC 76
           + F+R W + +CS    Q  A C    HS +YH+P +    R+AC
Sbjct: 770 NAFRRSWAERKCSIINSQTFAAC----HSKVYHLPYYEACVRDAC 810


>UniRef50_UPI0000251DBE Cluster: mucin 6, gastric; n=2; Homo
            sapiens|Rep: mucin 6, gastric - Homo sapiens
          Length = 2439

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 207  HTFQRVWRDAQCS*-GKQVVAVCMDFFHSSLYHIPKHRTL*RNAC 76
            + F+R W + +CS    Q  A C    HS +YH+P +    R+AC
Sbjct: 1050 NAFRRSWAERKCSVINSQTFATC----HSKVYHLPYYEACVRDAC 1090


>UniRef50_Q6W4X9 Cluster: Mucin-6 precursor; n=24; Tetrapoda|Rep:
            Mucin-6 precursor - Homo sapiens (Human)
          Length = 2392

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 207  HTFQRVWRDAQCS*-GKQVVAVCMDFFHSSLYHIPKHRTL*RNAC 76
            + F+R W + +CS    Q  A C    HS +YH+P +    R+AC
Sbjct: 1049 NAFRRSWAERKCSVINSQTFATC----HSKVYHLPYYEACVRDAC 1089


>UniRef50_P15188 Cluster: Orotidine 5'-phosphate decarboxylase;
           n=28; Fungi|Rep: Orotidine 5'-phosphate decarboxylase -
           Ustilago maydis (Smut fungus)
          Length = 283

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +2

Query: 251 LQIYSKELGETPSAVCKEPLKCIKRVCTKLV*SFSLAGKYKLAILLSRPVRNIICVRNKI 430
           LQ Y+    + P+   K  L+C++R  T L  S  +  K  L  +     RN+  V+  I
Sbjct: 6   LQSYASRAAKQPNPAAKALLECMERKQTNLCVSIDVTNKQDLLDVCEAVGRNVCLVKTHI 65

Query: 431 D 433
           D
Sbjct: 66  D 66


>UniRef50_UPI0000E46265 Cluster: PREDICTED: similar to fibrillin 2
            precursor; n=5; Strongylocentrotus purpuratus|Rep:
            PREDICTED: similar to fibrillin 2 precursor -
            Strongylocentrotus purpuratus
          Length = 2776

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +3

Query: 72   GGMRCVXAYGALVCGTDYCEKNPCIQPPLVC-PKNTEHRARHAGKCAC 212
            GG RCV   G +  G+   + N CIQ P +C    T    +   +C C
Sbjct: 2444 GGFRCVCPEGYIQHGSTCIDVNECIQTPDICGAYGTCQNTQGGHRCEC 2491


>UniRef50_Q9HFR4 Cluster: Autophagy-related protein 2; n=2;
           Fungi/Metazoa group|Rep: Autophagy-related protein 2 -
           Pichia pastoris (Yeast)
          Length = 1862

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 12/33 (36%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
 Frame = -2

Query: 605 LETYENIIIILDELHTS-SRYPDRVTCIIHTIS 510
           L+++EN+ II+D++H + S  P+ +T ++ T+S
Sbjct: 330 LQSFENVSIIIDQIHVAVSPIPESLTALLETLS 362


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,072,944
Number of Sequences: 1657284
Number of extensions: 11933606
Number of successful extensions: 29787
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29765
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)