Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0041
         (504 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   5.9  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.8  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   7.8  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 279 FPRQGSHLAPARYS 238
           FPR G+H+ P +Y+
Sbjct: 742 FPRCGNHIPPIKYN 755


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 225 ADSSWSTEPGPGANPDGGIKKL 290
           ADS  + E   G NPDG  +KL
Sbjct: 721 ADSLTTVEKEEGDNPDGEEEKL 742


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -2

Query: 491 CALVSTSALTHLKFSAIVVLG*FVILCLV 405
           CA+  +SA   +++   VVL   + +CL+
Sbjct: 835 CAIKVSSAFPTVRYQTAVVLASMIPICLL 863


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,224
Number of Sequences: 2352
Number of extensions: 8918
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)