Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0028
(792 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 26 0.46
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 26 0.46
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 26 0.46
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 26 0.46
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 26 0.46
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 26 0.46
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 25 0.81
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 24 1.4
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 24 1.9
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 2.5
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 3.3
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 3.3
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 3.3
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 3.3
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 4.3
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 5.7
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 22 7.5
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 7.5
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 21 9.9
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 9.9
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.46
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 656 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 558
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.46
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 656 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 558
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.46
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 656 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 558
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.46
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 656 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 558
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 25.8 bits (54), Expect = 0.46
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 656 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 558
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.46
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 656 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 558
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 25.0 bits (52), Expect = 0.81
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 8/44 (18%)
Frame = -3
Query: 346 PLPTLFYRLEALH--------LGDLLRIWVRTGATSPRTPSPEF 239
P P+L Y L L+ LG+ L IW+ A S RTPS F
Sbjct: 43 PNPSLHYLLALLYILFTFLALLGNGLVIWIFCAAKSLRTPSNMF 86
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 656 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 558
RT SC SR + RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDLRHEDRNSYRNDGERSCSRDRS 258
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.8 bits (49), Expect = 1.9
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -3
Query: 592 RKAGERGSGSSPKRKTIFASVILNIYSFEAALY*NTNSLKRT*RTNIDQTRHRPHPLPV 416
R +R S +RK I S + N Y + Y N N+ + NI+ P P+PV
Sbjct: 66 RSRDKRERERSKERKII--SSLSNNYISNISNYNNNNNYNKKLYYNINYIEQIPVPVPV 122
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.4 bits (48), Expect = 2.5
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = -3
Query: 271 ATSPRTPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFH 152
++S T SP S + +R CS + P+ + FH
Sbjct: 324 SSSTTTTSPMTSTKSTIVRNHLNSTCSVTNSPHQKKLRFH 363
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 656 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 558
RT SC SR + +RH+ +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDGNSYRNDGERSCSRDRS 258
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 645 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 544
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 645 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 544
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 645 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 544
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.6 bits (46), Expect = 4.3
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 562 SPKRKTIFASVILNIYSFEAALY*NTNSLKRT*RTNIDQTRHRPHPLPV 416
S +RK I S + N Y + Y N N+ + NI+ P P+PV
Sbjct: 314 SKERKII--SSLSNNYISNISNYNNNNNYNKKLYYNINYIEQIPVPVPV 360
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 5.7
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 115 PDLSAASSGHFGLPRRTLVFK 53
PDL+ S G GLP L +
Sbjct: 336 PDLAGTSQGSAGLPSAILAMR 356
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.8 bits (44), Expect = 7.5
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3
Query: 262 PRTPSPEFSRSAESIRTPPQMR 197
PR P P R AES P R
Sbjct: 81 PRPPHPRLRREAESEAEPGNNR 102
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 7.5
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -3
Query: 184 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 101
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 21.4 bits (43), Expect = 9.9
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -3
Query: 262 PRTPSPEFSRSAESIRTPPQMRCSSRSEPYLP 167
PR P P R AE P R S+P P
Sbjct: 80 PRPPHPRLRREAELEAEPGNNRPVYISQPRPP 111
Score = 21.4 bits (43), Expect = 9.9
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -3
Query: 262 PRTPSPEFSRSAESIRTPPQMRCSSRSEPYLP 167
PR P P R AE P R S+P P
Sbjct: 136 PRPPHPRLRREAELEAEPGNNRPVYISQPRPP 167
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.4 bits (43), Expect = 9.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 669 VERRSYRIVPIAHETKPTRLTARKIRGRPEN 577
VE + Y+ V I+ T+P+ T + P N
Sbjct: 183 VEEQRYKQVEISQMTEPSSSTKSYVLEGPRN 213
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,050
Number of Sequences: 438
Number of extensions: 5759
Number of successful extensions: 31
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -