Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0025
(699 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g02110.1 68414.m00137 proline-rich family protein contains pr... 31 0.97
At1g76965.1 68414.m08961 glycine-rich protein 29 2.2
At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to ... 29 3.9
At5g42370.1 68418.m05159 expressed protein 29 3.9
At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic... 29 3.9
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 29 3.9
At5g37380.2 68418.m04492 DNAJ heat shock N-terminal domain-conta... 28 5.2
At5g37380.1 68418.m04491 DNAJ heat shock N-terminal domain-conta... 28 5.2
At5g11770.1 68418.m01374 NADH-ubiquinone oxidoreductase 20 kDa s... 28 5.2
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox... 28 5.2
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 28 6.8
At2g02800.2 68415.m00225 protein kinase (APK2b) identical to pro... 28 6.8
At2g02800.1 68415.m00224 protein kinase (APK2b) identical to pro... 28 6.8
At5g22390.1 68418.m02612 expressed protein 27 9.0
>At1g02110.1 68414.m00137 proline-rich family protein contains
proline-rich domain, INTERPRO:IPR000694
Length = 679
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 471 ITHEHRPDPAPVASASRPNPTRPGPQSQSLFRSYGSNLPTSLTY 340
+ H P+P P S+P PTRP L S S+ P + Y
Sbjct: 83 VPSSHSPEPPPPPIRSKPKPTRPRRLPHILSDSSPSSSPATSFY 126
>At1g76965.1 68414.m08961 glycine-rich protein
Length = 158
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 448 PGTGRIRFPSKPDTPRSSEPILIPKLRIQFAD 353
PG + FP KP+ P P +P+L + F D
Sbjct: 93 PGAAIVVFPKKPEEPVKVVPTPMPQLNLFFGD 124
>At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to
autophagy 7 [Arabidopsis thaliana] GI:19912147; contains
Pfam profile PF00899: ThiF family
Length = 697
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -3
Query: 235 PQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRR 101
P ++G CG +V NH++LL +S+ L+ ++S +R +
Sbjct: 42 PISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNK 86
>At5g42370.1 68418.m05159 expressed protein
Length = 447
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 174 PFYRIPWNSNAQAEKKTLPGPLGGVFRPL-WVTPSNTR 64
P Y + + Q+ +K +P PL + R L W TPS R
Sbjct: 285 PLYDVTSSGLVQSVEKVVPRPLRSIVRLLFWYTPSTMR 322
>At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical
to low affinity calcium antiporter CAX2 (GI:1488267)
[Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 441
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +1
Query: 37 SIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFC--LSVRVPWNPI 168
S++ SL TS + PK P+++ S K +FC L++ +P+ P+
Sbjct: 41 SLMEQGSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPL 86
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 28.7 bits (61), Expect = 3.9
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = -1
Query: 483 AKTNITHEHRPDPAPVASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWR 304
A+ +T P P+ SRP P P P SL RS S TS + ++T+G P
Sbjct: 550 AEAAVTSSPLPPLKPLRILSRPPPPPPPPPISSL-RSTPSPSSTSNS---IATQGPPPPP 605
Query: 303 PAADMGTNRRDIST 262
P + ++R +S+
Sbjct: 606 PPPPLQSHRSALSS 619
>At5g37380.2 68418.m04492 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 488 NSLKRT*RTNIDQTRHRSHPLPVQTRHAPVLRANPYSEVTDP 363
N K T TN T R++P P Q + P + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190
>At5g37380.1 68418.m04491 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 488 NSLKRT*RTNIDQTRHRSHPLPVQTRHAPVLRANPYSEVTDP 363
N K T TN T R++P P Q + P + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190
>At5g11770.1 68418.m01374 NADH-ubiquinone oxidoreductase 20 kDa
subunit, mitochondrial identical to NADH-ubiquinone
oxidoreductase 20 kDa subunit mitochondrial [precursor]
SP:Q42577 from [Arabidopsis thaliana]; contains Pfam
profile: PF01058 NADH ubiquinone oxidoreductase, 20 Kd
subunit
Length = 218
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 486 LAKTNITHEHRPDPAPVASASRPNPTRPGPQSQS 385
+A +++H H PA S S + TRPGP S S
Sbjct: 22 VAAASVSHLHTSLPALSPSTSPTSYTRPGPPSTS 55
>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
[Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
thaliana]
Length = 926
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 230 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 132
+S + P R ++PYLPS G RTLR+K
Sbjct: 215 QSQKDHPSKRILFTNQPYLPSETPSGLRTLREK 247
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 211 GGVRILSADLENSGEDVRGDVAPVRTH 291
GG+++ S + ++S +R DV+P RTH
Sbjct: 12 GGLKVESGEQKSSWPTMRFDVSPYRTH 38
>At2g02800.2 68415.m00225 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 457 STRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 338
ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 368 STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
>At2g02800.1 68415.m00224 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 457 STRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 338
ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 368 STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
>At5g22390.1 68418.m02612 expressed protein
Length = 202
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 109 ERSGKSFLFCLSVRVPWNPIEG 174
+ S KSFL LS PWNP +G
Sbjct: 17 DNSPKSFLDTLSSSSPWNPSKG 38
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,530,771
Number of Sequences: 28952
Number of extensions: 381139
Number of successful extensions: 1417
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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