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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0021
         (611 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0456 + 29521282-29522064                                         32   0.41 
06_03_1448 + 30235336-30236763                                         31   0.54 
06_03_1443 + 30182018-30183445                                         31   0.54 
06_03_1440 + 30166515-30167942                                         31   0.54 
06_03_1437 + 30151030-30152457                                         31   0.54 
06_03_1429 + 30100834-30102261                                         31   0.54 
06_03_1425 + 30084383-30085810                                         31   0.54 
06_03_1420 - 30053713-30055140                                         31   0.54 
06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,890...    30   1.7  
03_04_0006 + 16257288-16259522                                         30   1.7  
06_03_0854 + 25400855-25403741,25406174-25407708                       29   2.9  
03_05_1067 - 30105850-30106034,30106036-30106192,30106301-30106399     29   2.9  
08_02_1255 + 25636634-25636956,25637462-25637894                       29   3.8  
06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764           29   3.8  
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742...    29   3.8  
10_08_0956 + 21796707-21797497,21799603-21799861,21799969-21800142     28   5.1  
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384...    28   5.1  
12_02_0077 - 13288916-13289659,13289689-13289691                       28   6.7  
06_01_0437 + 3101449-3101521,3101872-3102232,3103766-3103958,310...    28   6.7  
04_01_0416 - 5504415-5504590,5509032-5509116,5509190-5509322,550...    28   6.7  
02_04_0220 - 21014225-21014386,21014492-21014572,21014739-210149...    28   6.7  
02_02_0406 - 9888167-9888570,9890168-9890248,9892207-9892600           28   6.7  
06_03_0507 + 21603472-21603750,21604371-21604463,21605046-216053...    27   8.9  
01_06_1759 + 39689410-39689573,39689728-39689923,39690014-396901...    27   8.9  

>01_06_0456 + 29521282-29522064
          Length = 260

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
 Frame = -3

Query: 390 AWQC--PRTGSRGSFKRRRAFPPRHHSARLER----NTVRPPILSTA 268
           AW+C  P +G+RG  +RRR  P    S R  R    +T+RP + S A
Sbjct: 12  AWRCYSPASGARGGSRRRRRRPAGTTSRRCSRADRLDTLRPYVTSAA 58


>06_03_1448 + 30235336-30236763
          Length = 475

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 395 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTASANRVSNE 237
           +PP   L      +L+ GD+R+  V  LH W+E     R YR   +S +  S E
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSSGSWTSEE 178


>06_03_1443 + 30182018-30183445
          Length = 475

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 395 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTASANRVSNE 237
           +PP   L      +L+ GD+R+  V  LH W+E     R YR   +S +  S E
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSSGSWTSEE 178


>06_03_1440 + 30166515-30167942
          Length = 475

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 395 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTASANRVSNE 237
           +PP   L      +L+ GD+R+  V  LH W+E     R YR   +S +  S E
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSSGSWTSEE 178


>06_03_1437 + 30151030-30152457
          Length = 475

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 395 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTASANRVSNE 237
           +PP   L      +L+ GD+R+  V  LH W+E     R YR   +S +  S E
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSSGSWTSEE 178


>06_03_1429 + 30100834-30102261
          Length = 475

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 395 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTASANRVSNE 237
           +PP   L      +L+ GD+R+  V  LH W+E     R YR   +S +  S E
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSSGSWTSEE 178


>06_03_1425 + 30084383-30085810
          Length = 475

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 395 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTASANRVSNE 237
           +PP   L      +L+ GD+R+  V  LH W+E     R YR   +S +  S E
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSSGSWTSEE 178


>06_03_1420 - 30053713-30055140
          Length = 475

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = -1

Query: 395 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTASANRVSNE 237
           +PP   L      +L+ GD+R+  V  LH W+E     R YR   +S +  S E
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSSGSWTSEE 178


>06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,
            8905437-8905690,8905785-8908799,8908889-8909001,
            8909975-8910164,8910399-8910512,8910591-8910698,
            8910941-8911073,8911206-8911408,8911626-8911826
          Length = 1889

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 7    PRHLISDAHEWINEIPTVPIYYLAKPQPRERAWENQRGKKTLLSL 141
            PR +  D  EW N  PT+   ++ + +PRE     Q+ K  +  L
Sbjct: 1397 PRTVECDEGEWYNNFPTIDENHVQRNKPREEQIFQQKLKPAIFIL 1441


>03_04_0006 + 16257288-16259522
          Length = 744

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
 Frame = -2

Query: 202 AKRSP---TYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWE 50
           A+RSP    Y T L +   ARL    T    PA SP    +AV S   + G W+
Sbjct: 162 ARRSPWTVVYGTNLRTGETARLTPRGTFDLSPAVSPSGKRVAVASWQGKPGLWD 215


>06_03_0854 + 25400855-25403741,25406174-25407708
          Length = 1473

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -2

Query: 202 AKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 77
           AKR+PT  T    P  AR  +++   +F   +P P P +V+S
Sbjct: 475 AKRAPTAVTVGAPPPQARTPAAAPAKAF-VSAPAPAPSSVIS 515


>03_05_1067 - 30105850-30106034,30106036-30106192,30106301-30106399
          Length = 146

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 21/67 (31%), Positives = 30/67 (44%)
 Frame = +2

Query: 290 RTVFRSKRAEW*RGGNARRRLKLPRDPVRGHCQAGSLTGAVHLSKNNAGVLRPAQRGQKP 469
           R +   +R E    G +RR   L  D +RG+ +      A H     AG    + RG KP
Sbjct: 59  RCIAEGRREEEEEVGRSRRGKDLDLDDMRGYGET-----ATHHGLRLAGREEVSPRGGKP 113

Query: 470 RVEQKGK 490
           RV+  G+
Sbjct: 114 RVDNGGR 120


>08_02_1255 + 25636634-25636956,25637462-25637894
          Length = 251

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -3

Query: 390 AWQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILSTAHRFRQP 250
           A QC  +G  G+ +R   FPP   S   +++++ P   + A  FR P
Sbjct: 191 AEQCSGSGG-GNRRREPTFPPPRLSLHAQKSSLTPRSSNPASSFRSP 236


>06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764
          Length = 640

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 323 TTLHAWNETPCARRYY 276
           TT  AW ETPCA R++
Sbjct: 560 TTTEAWVETPCAHRFH 575


>01_06_1406 -
           37073548-37073822,37073892-37074111,37074200-37074246,
           37074404-37074576,37075161-37075238,37075751-37075813,
           37075889-37075961,37076150-37076189,37076302-37076368,
           37076719-37078472,37079128-37079230,37080041-37080078,
           37080221-37080347,37081944-37082152
          Length = 1088

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 331 RKRSSPFKTPA*SGSRTLPGGEFDWGGTSV 420
           +KR  P K PA S S+ LPG + + G  SV
Sbjct: 339 KKRGRPRKYPAPSNSKHLPGTDTELGNDSV 368


>10_08_0956 + 21796707-21797497,21799603-21799861,21799969-21800142
          Length = 407

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 22/84 (26%), Positives = 33/84 (39%)
 Frame = -1

Query: 452 ELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNGDERFRHVTTLHAWNETPCARRYYR 273
           E   GH +  + D     N  PGS +  +H+ VLN  +  R      A+ + P       
Sbjct: 313 ETQAGHWQNGVLDTLSTQNIIPGSPIAVNHSKVLNAVQEARRAAE-RAY-DVPRVDDKVN 370

Query: 272 PRTASANRVSNETMKVVVFQRRSR 201
              ASAN+ +N      V   + R
Sbjct: 371 RAVASANKAANAARVAAVKAAQKR 394


>03_02_0740 -
           10836752-10837052,10837756-10837814,10837901-10838476,
           10839965-10841686,10841776-10842173,10842264-10842318,
           10842989-10843048,10843444-10843540,10844885-10844955,
           10845029-10845109,10846054-10846124,10847951-10848119,
           10848521-10848683,10848752-10848942,10849037-10849168
          Length = 1381

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 410 PPQSNSPPGSVLEPDHAGVLNGDE 339
           P  +NS P +V +PD   +LNGDE
Sbjct: 739 PTSNNSVPQNVDQPDSKKMLNGDE 762


>12_02_0077 - 13288916-13289659,13289689-13289691
          Length = 248

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 145 ESSSTGSSFPADSPKPVPLAVVSLDSR 65
           ++ S G S P DS + VP+ VV+L  R
Sbjct: 3   DNQSLGKSLPKDSRRHVPVGVVALKKR 29


>06_01_0437 +
           3101449-3101521,3101872-3102232,3103766-3103958,
           3104051-3104848,3104997-3105143,3106024-3106377
          Length = 641

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +2

Query: 287 GRTVFRSKR--AEW*RGGNARRRLKLPRDPVRGHCQAGSLTGA 409
           G+T+ R  R  A W RG  A RR +LP     G  +AG   G+
Sbjct: 36  GQTLTRGPRTCAVWRRGRAAVRRRRLPAASAEGGAKAGRSLGS 78


>04_01_0416 -
           5504415-5504590,5509032-5509116,5509190-5509322,
           5509426-5510312
          Length = 426

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -2

Query: 175 PLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDS 68
           PL+ P  AR   SSTGSSFP  S  P    ++ L S
Sbjct: 47  PLIHPTPARF-ISSTGSSFPPYSEPPPSAPMLELGS 81


>02_04_0220 -
           21014225-21014386,21014492-21014572,21014739-21014938,
           21014999-21015157,21015248-21015377,21015520-21015673,
           21015785-21015867,21015981-21016040,21016131-21016217
          Length = 371

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = +2

Query: 374 RGHCQAGSLTGAVHLSKNNAGVLRPAQRGQKPRVEQKGKSWLDPDFSTHRDCE 532
           +GH     +T A    KNNAG L+  Q  Q+    Q GK  L    +T RD +
Sbjct: 212 KGHLWRSQITAAKEDKKNNAGALQLLQL-QEEACRQSGKDGL----ATERDVD 259


>02_02_0406 - 9888167-9888570,9890168-9890248,9892207-9892600
          Length = 292

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +2

Query: 347 RLKLPRDPVRGHCQAGSLTGAVHLSKNNAGVLRPAQRGQKPRVEQKGKSWLDPDFSTHRD 526
           RL+ P     G C A ++  A  +S    G++ PA+  ++P   ++      P  ++ R+
Sbjct: 30  RLRRPLAAAAGACVAAAVAAAAGVS---LGIVFPAEPAERPFCRERRMLEALPAAASSRE 86

Query: 527 CENTAYR 547
            E  AYR
Sbjct: 87  EEPEAYR 93


>06_03_0507 +
           21603472-21603750,21604371-21604463,21605046-21605372,
           21605588-21605863,21606095-21607114
          Length = 664

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -3

Query: 405 PVKLPAWQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPP 283
           P++LPA + P T +    +R +AF    +S R  ++T RPP
Sbjct: 398 PLQLPAGEPPVTPAWNDTQRSKAFT---YSIRARKDTNRPP 435


>01_06_1759 +
           39689410-39689573,39689728-39689923,39690014-39690103,
           39690221-39690277,39690391-39690460,39690747-39690811,
           39691408-39691462,39691704-39691831,39691919-39691950,
           39692205-39692274,39692723-39692824,39692921-39693010,
           39693084-39693232,39693620-39693731,39695332-39695412,
           39695481-39695705,39695815-39695937,39696021-39696137
          Length = 641

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 446 ALGHLRYSLTDVPPQSNSPPGSVLEP 369
           ALGH+   L + P ++  PP   ++P
Sbjct: 494 ALGHIELDLPEAPEKAPKPPAQAVDP 519


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,852,245
Number of Sequences: 37544
Number of extensions: 411605
Number of successful extensions: 1436
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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