Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0021
         (611 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061451-1|AAL28999.1|  249|Drosophila melanogaster LD38807p pro...    29   4.9  
BT003500-1|AAO39504.1| 1169|Drosophila melanogaster RE45036p pro...    28   8.6  
AE014297-2568|AAF55584.1|  950|Drosophila melanogaster CG7709-PA...    28   8.6  
AE013599-158|AAF57274.2| 1169|Drosophila melanogaster CG11212-PA...    28   8.6  

>AY061451-1|AAL28999.1|  249|Drosophila melanogaster LD38807p
           protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -1

Query: 206 SRETISHLCYTSHVSL---QCQTRVKLNRVFFPR*FSQARSLGC 84
           S+ TI   CY  ++S    QCQ R+   +VFF    S A    C
Sbjct: 14  SKRTIFETCYMKNISFLKTQCQARILFCKVFFAVHSSNANVPSC 57


>BT003500-1|AAO39504.1| 1169|Drosophila melanogaster RE45036p protein.
          Length = 1169

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -1

Query: 344  DERFRH--VTTLHAWNETPCARRYYRPRTASANRVSNETMKVVVFQRRSRETIS 189
            D  +RH  +  + A    P A+RY+R R++  +   ++     + +RR+R   S
Sbjct: 1072 DSSYRHQQIMAMPAAGSAPSAKRYHRRRSSEDSTSRHQRWPANIEERRARRAYS 1125


>AE014297-2568|AAF55584.1|  950|Drosophila melanogaster CG7709-PA
           protein.
          Length = 950

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -2

Query: 193 SPTYATPLMSPYNARLESSSTGSSFPADSPKP 98
           +P++ +   S Y A  +S+S+G  +PA +P+P
Sbjct: 153 APSFNSAPSSSYAAPSQSASSGGPYPAAAPRP 184


>AE013599-158|AAF57274.2| 1169|Drosophila melanogaster CG11212-PA
            protein.
          Length = 1169

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -1

Query: 344  DERFRH--VTTLHAWNETPCARRYYRPRTASANRVSNETMKVVVFQRRSRETIS 189
            D  +RH  +  + A    P A+RY+R R++  +   ++     + +RR+R   S
Sbjct: 1072 DSSYRHQQIMAMPAAGSAPSAKRYHRRRSSEDSTSRHQRWPANIEERRARRAYS 1125


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,695,821
Number of Sequences: 53049
Number of extensions: 648230
Number of successful extensions: 2092
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2092
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)