Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0020
(499 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock prote... 24 0.66
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 22 2.7
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 22 2.7
AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A prot... 22 2.7
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 22 2.7
AY819656-1|AAV70656.1| 56|Tribolium castaneum elongation facto... 22 3.5
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 21 8.1
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 21 8.1
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 21 8.1
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 21 8.1
>AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock protein
70 protein.
Length = 195
Score = 24.2 bits (50), Expect = 0.66
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -2
Query: 489 AKNGTSNSARKFFTLKDMPHIVRALDRNQKVHSDILXVIGNTPLVKLSKLPKD 331
AK N+ + TLK + ++ D + +I+ V G+T + K+ +L KD
Sbjct: 127 AKFEELNNDQFLKTLKPVKKVLEDADMTKDQIDEIVLVGGSTRIPKIQQLIKD 179
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 22.2 bits (45), Expect = 2.7
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 119 HYNAPVPSDSSGKCQSDSCVTRCGFYYD*LARLQNTLLFCIQKHAEAMRSLTDPP 283
H A V + SS S S FY+ + + + L C Q A + + D P
Sbjct: 77 HNGAAVSAASSVSAASASMAVAAQFYHQAASAVVDPLNSCSQPAAPGGQPIPDIP 131
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 22.2 bits (45), Expect = 2.7
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 119 HYNAPVPSDSSGKCQSDSCVTRCGFYYD*LARLQNTLLFCIQKHAEAMRSLTDPP 283
H A V + SS S S FY+ + + + L C Q A + + D P
Sbjct: 136 HNGAAVSAASSVSAASASMAVAAQFYHQAASAVVDPLNSCSQPAAPGGQPIPDIP 190
>AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A
protein.
Length = 150
Score = 22.2 bits (45), Expect = 2.7
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 119 HYNAPVPSDSSGKCQSDSCVTRCGFYYD*LARLQNTLLFCIQKHAEAMRSLTDPP 283
H A V + SS S S FY+ + + + L C Q A + + D P
Sbjct: 77 HNGAAVSAASSVSAASASMAVAAQFYHQAASAVVDPLNSCSQPAAPGGQPIPDIP 131
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 22.2 bits (45), Expect = 2.7
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +2
Query: 119 HYNAPVPSDSSGKCQSDSCVTRCGFYYD*LARLQNTLLFCIQKHAEAMRSLTDPP 283
H A V + SS S S FY+ + + + L C Q A + + D P
Sbjct: 136 HNGAAVSAASSVSAASASMAVAAQFYHQAASAVVDPLNSCSQPAAPGGQPIPDIP 190
>AY819656-1|AAV70656.1| 56|Tribolium castaneum elongation factor
1-alpha protein.
Length = 56
Score = 21.8 bits (44), Expect = 3.5
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 232 QKGILKPGKSVIVEPTSGNTGI 167
+ G+LKPG V+ P + T +
Sbjct: 19 ETGVLKPGMVVVFAPANITTEV 40
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 20.6 bits (41), Expect = 8.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 215 LQNTLLFCIQKHAEAMRSL 271
LQN C +KH E +R +
Sbjct: 67 LQNECAKCNEKHKEGVRKV 85
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 20.6 bits (41), Expect = 8.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 215 LQNTLLFCIQKHAEAMRSL 271
LQN C +KH E +R +
Sbjct: 68 LQNECAKCNEKHKEGVRKV 86
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 20.6 bits (41), Expect = 8.1
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +2
Query: 29 VPGSFSWRADYFSTQCDKCVYFFI*HFLRQHYNAPVPSDSSGKCQSD 169
V G FS Y CD C FF +R++ + G C D
Sbjct: 40 VCGDFSSGKHYNIFACDGCAGFFK-RSIRRNRQYVCKAKDEGSCIID 85
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 20.6 bits (41), Expect = 8.1
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +2
Query: 29 VPGSFSWRADYFSTQCDKCVYFFI*HFLRQHYNAPVPSDSSGKCQSD 169
V G FS Y CD C FF +R++ + G C D
Sbjct: 40 VCGDFSSGKHYNIFACDGCAGFFK-RSIRRNRQYVCKAKDEGSCIID 85
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,444
Number of Sequences: 336
Number of extensions: 3142
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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