Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0020
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical ... 103 7e-23
Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical pr... 98 4e-21
Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical pr... 98 4e-21
Z78415-10|CAB01676.2| 341|Caenorhabditis elegans Hypothetical p... 75 3e-14
Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical pr... 73 9e-14
U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AF016425-2|AAB65342.1| 337|Caenorhabditis elegans Hypothetical ... 63 9e-11
Z81054-11|CAB02888.1| 430|Caenorhabditis elegans Hypothetical p... 36 0.012
Z70683-7|CAA94593.1| 430|Caenorhabditis elegans Hypothetical pr... 36 0.012
Z70683-3|CAA94589.1| 435|Caenorhabditis elegans Hypothetical pr... 34 0.050
AF077539-2|AAK84579.2| 427|Caenorhabditis elegans Hypothetical ... 31 0.46
Z80219-2|CAB02298.1| 317|Caenorhabditis elegans Hypothetical pr... 30 0.81
Z83236-5|CAB05784.1| 315|Caenorhabditis elegans Hypothetical pr... 29 1.4
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 28 4.3
AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical ... 27 5.7
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 27 7.6
Z93386-4|CAB07644.1| 370|Caenorhabditis elegans Hypothetical pr... 27 10.0
>AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical
protein F54A3.4 protein.
Length = 755
Score = 103 bits (247), Expect = 7e-23
Identities = 46/72 (63%), Positives = 58/72 (80%)
Frame = -1
Query: 226 GILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVALGAEIIRTP 47
G L PG + ++EPTSGNTGIGL+L AAVRGY+C+I +PEKMS EK TL LG+ I+RTP
Sbjct: 397 GALTPGATTLIEPTSGNTGIGLSLVAAVRGYKCLITMPEKMSKEKSTTLSVLGSTIVRTP 456
Query: 46 TEAAWDSPESNI 11
EAA++SP S+I
Sbjct: 457 NEAAFNSPSSHI 468
Score = 66.9 bits (156), Expect = 8e-12
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -2
Query: 399 VHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIA 256
V +L IG TPLVKL +PK G++C +Y KCEFLN GGS KDRIA
Sbjct: 336 VLDSVLDAIGKTPLVKLQHVPKAHGVRCNVYVKCEFLNAGGSTKDRIA 383
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = -2
Query: 366 TPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIASACFWMQN 232
T LV L KL + LK ++Y K E+LN GS++DR A F M N
Sbjct: 21 TQLVPLKKLKAEFQLKSDIYVKLEYLNISGSLEDRAAHRAFEMSN 65
>Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 97.9 bits (233), Expect = 4e-21
Identities = 51/85 (60%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Frame = -1
Query: 253 RMFLDAEQKGILKPGKSV----IVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVN 86
RM AE+ G KPGK V ++EPTSGNTGIGL+LA+AVRGY+CII +P+KMS EK
Sbjct: 427 RMVEIAEKTG--KPGKLVPGVTLIEPTSGNTGIGLSLASAVRGYKCIITMPKKMSKEKSI 484
Query: 85 TLVALGAEIIRTPTEAAWDSPESNI 11
+ +LG+ IIRTP EA +DSP S+I
Sbjct: 485 AMASLGSTIIRTPNEAGFDSPHSHI 509
Score = 66.1 bits (154), Expect = 1e-11
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = -2
Query: 387 ILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIA 256
+L IG TPLVKL +PK G+KC +Y KCE++N GGS KDRIA
Sbjct: 382 VLDAIGKTPLVKLQHIPKAHGVKCNVYVKCEYMNAGGSTKDRIA 425
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -2
Query: 366 TPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIASACF 244
TPLV L KL + L+ ++Y K E+LN GS++DR A F
Sbjct: 30 TPLVPLKKLKVEHQLQSDIYVKLEYLNIAGSLEDRTADKAF 70
>Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 97.9 bits (233), Expect = 4e-21
Identities = 51/85 (60%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Frame = -1
Query: 253 RMFLDAEQKGILKPGKSV----IVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVN 86
RM AE+ G KPGK V ++EPTSGNTGIGL+LA+AVRGY+CII +P+KMS EK
Sbjct: 427 RMVEIAEKTG--KPGKLVPGVTLIEPTSGNTGIGLSLASAVRGYKCIITMPKKMSKEKSI 484
Query: 85 TLVALGAEIIRTPTEAAWDSPESNI 11
+ +LG+ IIRTP EA +DSP S+I
Sbjct: 485 AMASLGSTIIRTPNEAGFDSPHSHI 509
Score = 66.1 bits (154), Expect = 1e-11
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = -2
Query: 387 ILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIA 256
+L IG TPLVKL +PK G+KC +Y KCE++N GGS KDRIA
Sbjct: 382 VLDAIGKTPLVKLQHIPKAHGVKCNVYVKCEYMNAGGSTKDRIA 425
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -2
Query: 366 TPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIASACF 244
TPLV L KL + L+ ++Y K E+LN GS++DR A F
Sbjct: 30 TPLVPLKKLKVEHQLQSDIYVKLEYLNIAGSLEDRTADKAF 70
>Z78415-10|CAB01676.2| 341|Caenorhabditis elegans Hypothetical
protein C17G1.7 protein.
Length = 341
Score = 74.9 bits (176), Expect = 3e-14
Identities = 33/67 (49%), Positives = 45/67 (67%)
Frame = -1
Query: 250 MFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVAL 71
M AE+ G + PG + ++EPTSGNTGI LA AA +GYRCI+ +P MS E+ L A
Sbjct: 55 MLAAAEKDGTVIPGVTTLIEPTSGNTGIALAFVAAAKGYRCIVTMPASMSGERRTLLKAY 114
Query: 70 GAEIIRT 50
G+E++ T
Sbjct: 115 GSEVVLT 121
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = -2
Query: 414 DRNQKVHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIASA 250
DRN + + +IGNTP+V ++KL K GL + K E++NP GSVKDRI +A
Sbjct: 3 DRNS-IGENAAALIGNTPMVYINKLTK--GLPGTVAVKIEYMNPAGSVKDRIGAA 54
>Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical
protein K10H10.2 protein.
Length = 337
Score = 73.3 bits (172), Expect = 9e-14
Identities = 35/75 (46%), Positives = 48/75 (64%)
Frame = -1
Query: 259 SFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTL 80
+F M AE+ G++ PGK+V++EPTSGN GI LA +RGY+ I+ +P MS E+ L
Sbjct: 51 AFNMIDTAEKAGLITPGKTVLIEPTSGNMGIALAYCGKLRGYKVILTMPASMSIERRCLL 110
Query: 79 VALGAEIIRTPTEAA 35
A GAE+I T A
Sbjct: 111 KAYGAEVILTDPATA 125
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -2
Query: 378 VIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIA 256
+IGNTPL+KL+K+ KD G + K E++NP SVKDRIA
Sbjct: 13 LIGNTPLLKLNKIGKDLG--ASIAVKVEYMNPACSVKDRIA 51
>U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical
protein R08E5.2c protein.
Length = 304
Score = 65.7 bits (153), Expect = 2e-11
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = -1
Query: 241 DAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVALGAE 62
+AE+ G + PGK+V+VE TSGN GI LA +RGY+ I+V+P MS E+ L A GAE
Sbjct: 57 EAEKAGTIVPGKTVLVEGTSGNLGIALAHIGKIRGYKVILVMPATMSVERRAMLRAYGAE 116
Query: 61 II 56
+I
Sbjct: 117 VI 118
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = -2
Query: 375 IGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIASA 250
IGNTPLV L + K GL + K E+LNP SVKDRIA +
Sbjct: 14 IGNTPLVLLRNISK--GLDARIAVKVEYLNPSCSVKDRIAKS 53
>U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical
protein R08E5.2a protein.
Length = 337
Score = 65.7 bits (153), Expect = 2e-11
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = -1
Query: 241 DAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVALGAE 62
+AE+ G + PGK+V+VE TSGN GI LA +RGY+ I+V+P MS E+ L A GAE
Sbjct: 57 EAEKAGTIVPGKTVLVEGTSGNLGIALAHIGKIRGYKVILVMPATMSVERRAMLRAYGAE 116
Query: 61 II 56
+I
Sbjct: 117 VI 118
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = -2
Query: 375 IGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIASA 250
IGNTPLV L + K GL + K E+LNP SVKDRIA +
Sbjct: 14 IGNTPLVLLRNISK--GLDARIAVKVEYLNPSCSVKDRIAKS 53
>AF016425-2|AAB65342.1| 337|Caenorhabditis elegans Hypothetical
protein F59A7.9 protein.
Length = 337
Score = 63.3 bits (147), Expect = 9e-11
Identities = 32/62 (51%), Positives = 42/62 (67%)
Frame = -1
Query: 241 DAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVALGAE 62
DAE+ G + PGK+V+VE TSGN GI LA +RGY+ I+V+ MS E+ L A GAE
Sbjct: 57 DAEKAGKIVPGKTVLVEGTSGNLGIALAHIGRIRGYKVILVMTTAMSIERRAMLRAYGAE 116
Query: 61 II 56
+I
Sbjct: 117 VI 118
Score = 44.0 bits (99), Expect = 6e-05
Identities = 26/54 (48%), Positives = 31/54 (57%)
Frame = -2
Query: 417 LDRNQKVHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIA 256
+ R VH D +GNTPLV L + K GL + K E+LNP SVKDRIA
Sbjct: 1 MSRELMVH-DSGDTVGNTPLVLLRNITK--GLDARIAVKIEYLNPSCSVKDRIA 51
>Z81054-11|CAB02888.1| 430|Caenorhabditis elegans Hypothetical
protein F01D4.8 protein.
Length = 430
Score = 36.3 bits (80), Expect = 0.012
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = -1
Query: 259 SFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTL 80
++ + L A +G + S + + TSGN G A + G V+ E+ EK++ +
Sbjct: 92 AWALLLWAIVEGKVTSKTSAVYDATSGNMGSAEAYMCTLVGIPYFAVVSEECEQEKIDNI 151
Query: 79 VALGAEIIRTPT 44
G ++I+ PT
Sbjct: 152 EKFGGKVIKVPT 163
>Z70683-7|CAA94593.1| 430|Caenorhabditis elegans Hypothetical
protein F01D4.8 protein.
Length = 430
Score = 36.3 bits (80), Expect = 0.012
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = -1
Query: 259 SFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTL 80
++ + L A +G + S + + TSGN G A + G V+ E+ EK++ +
Sbjct: 92 AWALLLWAIVEGKVTSKTSAVYDATSGNMGSAEAYMCTLVGIPYFAVVSEECEQEKIDNI 151
Query: 79 VALGAEIIRTPT 44
G ++I+ PT
Sbjct: 152 EKFGGKVIKVPT 163
>Z70683-3|CAA94589.1| 435|Caenorhabditis elegans Hypothetical
protein F13B12.4 protein.
Length = 435
Score = 34.3 bits (75), Expect = 0.050
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = -1
Query: 259 SFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTL 80
++ + L A +G + S + + TSGNTG A + V+ + + EKV +
Sbjct: 93 AWALLLWAITEGKVTSKTSAVYDSTSGNTGSAEAYMCTLVNVPYYAVVADNLEKEKVKQI 152
Query: 79 VALGAEIIRTP 47
+ G +II+ P
Sbjct: 153 ESFGGKIIKVP 163
>AF077539-2|AAK84579.2| 427|Caenorhabditis elegans Hypothetical
protein T25D3.3 protein.
Length = 427
Score = 31.1 bits (67), Expect = 0.46
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = -1
Query: 262 HSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNT 83
+S+ + + A +G +K G V E +SGNT L + G + V+P+ + KV
Sbjct: 97 YSWSLMMWALLEGHVKNGTHVF-EASSGNTACSLGYMCRLLGLQFTAVVPDTIEQVKVRR 155
Query: 82 LVALGAEIIRTP 47
+ ++R P
Sbjct: 156 IEEQEGFVVRVP 167
>Z80219-2|CAB02298.1| 317|Caenorhabditis elegans Hypothetical
protein T01H8.2 protein.
Length = 317
Score = 30.3 bits (65), Expect = 0.81
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -1
Query: 217 KPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVALGAEII 56
K K +I +SGN G LA AA G C IV+P+ K+ + A I+
Sbjct: 70 KNAKGMIAH-SSGNHGQALAWAAQKIGLPCTIVVPKNAPISKIEGMREYNANIV 122
>Z83236-5|CAB05784.1| 315|Caenorhabditis elegans Hypothetical
protein K10H10.6 protein.
Length = 315
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -1
Query: 295 VPQPWRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIV 119
+P+ R+RQ HS R + D KGI GK+ + T+ G+ A A+ G +++
Sbjct: 1 MPETKRVRQF-HS-RTYADEVLKGIDVAGKTYAITGTTSGIGVDTAEVLALAGAHVVLI 57
>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
assigned gene nameprotein 80 protein.
Length = 4900
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 281 PGLRNSHFAYISHFNPSSLGNLDNFTS 361
P LR + Y SHF+PS + +L + TS
Sbjct: 4617 PPLRRTSITYTSHFSPSVIRDLRSSTS 4643
>AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical
protein ZK105.3 protein.
Length = 802
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 326 PSSLGNLDNFTSGVFPI 376
P + N+DNFTS +FPI
Sbjct: 532 PENFTNVDNFTSTIFPI 548
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 57 IISAPNATSVFTFSSDIFSGNTIMHLYPLTAAASAS---PIPVLPDVGSTMTDLP 212
I++ P +S+ + S+ + SG++ + A +S++ P P GSTMT P
Sbjct: 601 IMTTPGTSSIPSISTSVNSGSSTIGSTVTQAPSSSTSMGPSPSQSTAGSTMTSAP 655
>Z93386-4|CAB07644.1| 370|Caenorhabditis elegans Hypothetical
protein R11H6.5 protein.
Length = 370
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 259 SFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLAL 155
+FR F + GI P +++P S N IG L
Sbjct: 261 AFRRFFEIIAAGIFLPKSPCLIDPVSANYRIGFDL 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,125,526
Number of Sequences: 27780
Number of extensions: 297561
Number of successful extensions: 768
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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