Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0020
(499 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14880.2 68417.m02286 cysteine synthase / O-acetylserine (thi... 88 3e-18
At4g14880.1 68417.m02285 cysteine synthase / O-acetylserine (thi... 88 3e-18
At3g59760.3 68416.m06669 cysteine synthase, mitochondrial, putat... 88 3e-18
At3g59760.2 68416.m06668 cysteine synthase, mitochondrial, putat... 88 3e-18
At3g59760.1 68416.m06667 cysteine synthase, mitochondrial, putat... 88 3e-18
At3g22460.1 68416.m02839 cysteine synthase, putative / O-acetyls... 87 5e-18
At5g28020.2 68418.m03375 cysteine synthase, putative / O-acetyls... 81 3e-16
At5g28020.1 68418.m03374 cysteine synthase, putative / O-acetyls... 81 3e-16
At2g43750.1 68415.m05439 cysteine synthase, chloroplast / O-acet... 81 3e-16
At3g04940.1 68416.m00536 cysteine synthase, putative / O-acetyls... 80 9e-16
At5g28030.2 68418.m03377 cysteine synthase, putative / O-acetyls... 76 2e-14
At5g28030.1 68418.m03376 cysteine synthase, putative / O-acetyls... 76 2e-14
At3g03630.1 68416.m00366 cysteine synthase, chloroplast, putativ... 74 6e-14
At3g61440.1 68416.m06881 cysteine synthase, putative / O-acetyls... 73 8e-14
At1g55880.2 68414.m06409 pyridoxal-5'-phosphate-dependent enzyme... 59 2e-09
At1g55880.1 68414.m06408 pyridoxal-5'-phosphate-dependent enzyme... 59 2e-09
At4g11640.1 68417.m01861 serine racemase, putative similar to se... 34 0.046
At1g17910.1 68414.m02217 wall-associated kinase, putative contai... 34 0.046
At5g58300.1 68418.m07298 leucine-rich repeat transmembrane prote... 31 0.57
At5g35750.1 68418.m04281 histidine kinase (AHK2) identical to hi... 29 1.3
At3g10050.1 68416.m01205 threonine ammonia-lyase / threonine deh... 29 1.7
At3g07140.2 68416.m00851 GPI transamidase component Gpi16 subuni... 29 2.3
At3g07140.1 68416.m00850 GPI transamidase component Gpi16 subuni... 29 2.3
At4g30990.1 68417.m04398 expressed protein ; expression supporte... 28 3.0
At3g53360.1 68416.m05889 pentatricopeptide (PPR) repeat-containi... 28 3.0
At3g06060.1 68416.m00693 short-chain dehydrogenase/reductase (SD... 28 3.0
At5g19200.1 68418.m02286 short-chain dehydrogenase/reductase (SD... 28 4.0
At3g14980.1 68416.m01894 PHD finger transcription factor, putati... 28 4.0
At3g60400.1 68416.m06755 mitochondrial transcription termination... 27 5.3
At3g05340.1 68416.m00582 pentatricopeptide (PPR) repeat-containi... 27 5.3
At2g20970.1 68415.m02481 hypothetical protein 27 5.3
At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family... 27 7.0
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 27 9.3
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 27 9.3
At3g07960.1 68416.m00973 phosphatidylinositol-4-phosphate 5-kina... 27 9.3
At2g29940.1 68415.m03642 ABC transporter family protein similar ... 27 9.3
>At4g14880.2 68417.m02286 cysteine synthase / O-acetylserine
(thiol)-lyase / O-acetylserine sulfhydrylase (OAS1)
nearly identical to SP|P47998 Cysteine synthase (EC
4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) {Arabidopsis thaliana}; identical to cDNA
O-acetylserine lyase (At.OAS.5-8) GI:6983573
Length = 322
Score = 88.2 bits (209), Expect = 3e-18
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = -1
Query: 304 KMRVPQPWRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCI 125
K+ + +P + F M DAE+KG++KPG+SV++EPTSGNTG+GLA AA +GY+ I
Sbjct: 35 KLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLI 94
Query: 124 IVLPEKMSDEKVNTLVALGAEIIRT 50
I +P MS E+ L+A G E++ T
Sbjct: 95 ITMPASMSTERRIILLAFGVELVLT 119
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = -2
Query: 402 KVHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRI 259
++ D+ +IGNTPLV L+ + EG + AK E + P SVKDRI
Sbjct: 4 RIAKDVTELIGNTPLVYLNNVA--EGCVGRVAAKLEMMEPCSSVKDRI 49
>At4g14880.1 68417.m02285 cysteine synthase / O-acetylserine
(thiol)-lyase / O-acetylserine sulfhydrylase (OAS1)
nearly identical to SP|P47998 Cysteine synthase (EC
4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) {Arabidopsis thaliana}; identical to cDNA
O-acetylserine lyase (At.OAS.5-8) GI:6983573
Length = 322
Score = 88.2 bits (209), Expect = 3e-18
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = -1
Query: 304 KMRVPQPWRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCI 125
K+ + +P + F M DAE+KG++KPG+SV++EPTSGNTG+GLA AA +GY+ I
Sbjct: 35 KLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLI 94
Query: 124 IVLPEKMSDEKVNTLVALGAEIIRT 50
I +P MS E+ L+A G E++ T
Sbjct: 95 ITMPASMSTERRIILLAFGVELVLT 119
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = -2
Query: 402 KVHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRI 259
++ D+ +IGNTPLV L+ + EG + AK E + P SVKDRI
Sbjct: 4 RIAKDVTELIGNTPLVYLNNVA--EGCVGRVAAKLEMMEPCSSVKDRI 49
>At3g59760.3 68416.m06669 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 430
Score = 88.2 bits (209), Expect = 3e-18
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = -1
Query: 304 KMRVPQPWRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCI 125
K+ + +P + + M DAEQKG + PGKSV+VEPTSGNTGIGLA AA RGYR I
Sbjct: 143 KLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLI 202
Query: 124 IVLPEKMSDEKVNTLVALGAEIIRT 50
+ +P MS E+ L A GAE++ T
Sbjct: 203 LTMPASMSMERRVLLKAFGAELVLT 227
Score = 33.5 bits (73), Expect = 0.081
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -2
Query: 399 VHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRI 259
+ ++ +IG TP+V L+ + K G + AK E + P SVKDRI
Sbjct: 113 IADNVSQLIGKTPMVYLNSIAK--GCVANIAAKLEIMEPCCSVKDRI 157
>At3g59760.2 68416.m06668 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 432
Score = 88.2 bits (209), Expect = 3e-18
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = -1
Query: 304 KMRVPQPWRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCI 125
K+ + +P + + M DAEQKG + PGKSV+VEPTSGNTGIGLA AA RGYR I
Sbjct: 143 KLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLI 202
Query: 124 IVLPEKMSDEKVNTLVALGAEIIRT 50
+ +P MS E+ L A GAE++ T
Sbjct: 203 LTMPASMSMERRVLLKAFGAELVLT 227
Score = 33.5 bits (73), Expect = 0.081
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -2
Query: 399 VHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRI 259
+ ++ +IG TP+V L+ + K G + AK E + P SVKDRI
Sbjct: 113 IADNVSQLIGKTPMVYLNSIAK--GCVANIAAKLEIMEPCCSVKDRI 157
>At3g59760.1 68416.m06667 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 433
Score = 88.2 bits (209), Expect = 3e-18
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = -1
Query: 304 KMRVPQPWRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCI 125
K+ + +P + + M DAEQKG + PGKSV+VEPTSGNTGIGLA AA RGYR I
Sbjct: 143 KLEIMEPCCSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLI 202
Query: 124 IVLPEKMSDEKVNTLVALGAEIIRT 50
+ +P MS E+ L A GAE++ T
Sbjct: 203 LTMPASMSMERRVLLKAFGAELVLT 227
Score = 33.5 bits (73), Expect = 0.081
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -2
Query: 399 VHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRI 259
+ ++ +IG TP+V L+ + K G + AK E + P SVKDRI
Sbjct: 113 IADNVSQLIGKTPMVYLNSIAK--GCVANIAAKLEIMEPCCSVKDRI 157
>At3g22460.1 68416.m02839 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative nearly identical over 185 amino
acids to SP|P47998 Cysteine synthase (EC 4.2.99.8)
(O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) {Arabidopsis thaliana}
Length = 188
Score = 87.4 bits (207), Expect = 5e-18
Identities = 40/85 (47%), Positives = 58/85 (68%)
Frame = -1
Query: 304 KMRVPQPWRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCI 125
K+ + +P + + M DAE KG++KPG+SV++EPTSGNTG+GLA AA +GY+ +
Sbjct: 38 KLEMMEPCSSVKDRIGYSMIADAEAKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLV 97
Query: 124 IVLPEKMSDEKVNTLVALGAEIIRT 50
I +P MS E+ L+A GAE+I T
Sbjct: 98 ITMPASMSIERRIILLAFGAELILT 122
Score = 42.7 bits (96), Expect = 1e-04
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = -2
Query: 402 KVHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRI 259
K+ D+ +IGNTPLV L+K+ KD + AK E + P SVKDRI
Sbjct: 7 KIAKDVTELIGNTPLVYLNKVAKD--CVGHVAAKLEMMEPCSSVKDRI 52
>At5g28020.2 68418.m03375 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 323
Score = 81.4 bits (192), Expect = 3e-16
Identities = 39/82 (47%), Positives = 55/82 (67%)
Frame = -1
Query: 304 KMRVPQPWRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCI 125
K+ + +P + ++ M DAE KG++ PGKS ++EPT+GNTGIGLA A RGY+ I
Sbjct: 37 KLEMMEPCSSVKDRIAYSMIKDAEDKGLITPGKSTLIEPTAGNTGIGLACMGAARGYKVI 96
Query: 124 IVLPEKMSDEKVNTLVALGAEI 59
+V+P MS E+ L ALGAE+
Sbjct: 97 LVMPSTMSLERRIILRALGAEL 118
Score = 40.3 bits (90), Expect = 7e-04
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -2
Query: 399 VHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIA 256
+ +DI +IGNTP+V L+ + +G + AK E + P SVKDRIA
Sbjct: 7 IKNDITELIGNTPMVYLNNVV--DGCVARIAAKLEMMEPCSSVKDRIA 52
>At5g28020.1 68418.m03374 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 323
Score = 81.4 bits (192), Expect = 3e-16
Identities = 39/82 (47%), Positives = 55/82 (67%)
Frame = -1
Query: 304 KMRVPQPWRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCI 125
K+ + +P + ++ M DAE KG++ PGKS ++EPT+GNTGIGLA A RGY+ I
Sbjct: 37 KLEMMEPCSSVKDRIAYSMIKDAEDKGLITPGKSTLIEPTAGNTGIGLACMGAARGYKVI 96
Query: 124 IVLPEKMSDEKVNTLVALGAEI 59
+V+P MS E+ L ALGAE+
Sbjct: 97 LVMPSTMSLERRIILRALGAEL 118
Score = 40.3 bits (90), Expect = 7e-04
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -2
Query: 399 VHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIA 256
+ +DI +IGNTP+V L+ + +G + AK E + P SVKDRIA
Sbjct: 7 IKNDITELIGNTPMVYLNNVV--DGCVARIAAKLEMMEPCSSVKDRIA 52
>At2g43750.1 68415.m05439 cysteine synthase, chloroplast /
O-acetylserine (thiol)-lyase / O-acetylserine
sulfhydrylase / cpACS1 (OASB) identical to SP|P47999
Cysteine synthase, chloroplast precursor (EC 4.2.99.8)
(O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) (cpACS1) {Arabidopsis thaliana};
identical to cDNA O-acetylserine lyase (At.OAS.7-4)
GI:6983575
Length = 392
Score = 81.4 bits (192), Expect = 3e-16
Identities = 40/85 (47%), Positives = 56/85 (65%)
Frame = -1
Query: 304 KMRVPQPWRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCI 125
K+ + +P + + M DAE+KG++ PGKSV+VE TSGNTGIGLA AA +GY+ I
Sbjct: 105 KLEIMEPCCSVKDRIGYSMITDAEEKGLITPGKSVLVESTSGNTGIGLAFIAASKGYKLI 164
Query: 124 IVLPEKMSDEKVNTLVALGAEIIRT 50
+ +P MS E+ L A GAE++ T
Sbjct: 165 LTMPASMSLERRVLLRAFGAELVLT 189
Score = 31.9 bits (69), Expect = 0.25
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -2
Query: 378 VIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRI 259
+IG TP+V L+ + K G + AK E + P SVKDRI
Sbjct: 82 LIGKTPMVYLNNVVK--GCVASVAAKLEIMEPCCSVKDRI 119
>At3g04940.1 68416.m00536 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 324
Score = 79.8 bits (188), Expect = 9e-16
Identities = 36/82 (43%), Positives = 54/82 (65%)
Frame = -1
Query: 304 KMRVPQPWRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCI 125
K+ + +P + ++ M DAE KG++ PGKS ++E TSGNTGIGLA A +GY+ +
Sbjct: 38 KLEMMEPCSSVKERIAYGMIKDAEDKGLITPGKSTLIEATSGNTGIGLAFIGAAKGYKVV 97
Query: 124 IVLPEKMSDEKVNTLVALGAEI 59
+ +P MS E+ L+ALGAE+
Sbjct: 98 LTMPSSMSLERKIILLALGAEV 119
Score = 36.7 bits (81), Expect = 0.009
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -2
Query: 399 VHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIA 256
+ D +IGNTP+V L+ + +G + AK E + P SVK+RIA
Sbjct: 8 IKDDATQLIGNTPMVYLNNIV--DGCVARIAAKLEMMEPCSSVKERIA 53
>At5g28030.2 68418.m03377 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase [Brassica juncea] GI:2245144; contains Pfam
profile PF00291: Pyridoxal-phosphate dependent enzyme
Length = 323
Score = 75.8 bits (178), Expect = 2e-14
Identities = 37/82 (45%), Positives = 53/82 (64%)
Frame = -1
Query: 304 KMRVPQPWRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCI 125
K+ + +P + ++ M DAE KG++ PGKS ++E T GNTGIGLA A RGY+ I
Sbjct: 37 KLEMMEPCSSIKDRIAYSMIKDAEDKGLITPGKSTLIEATGGNTGIGLASIGASRGYKVI 96
Query: 124 IVLPEKMSDEKVNTLVALGAEI 59
+++P MS E+ L ALGAE+
Sbjct: 97 LLMPSTMSLERRIILRALGAEV 118
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = -2
Query: 399 VHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIA 256
+ +D+ +IGNTP+V L+K+ +G + AK E + P S+KDRIA
Sbjct: 7 IKNDVTELIGNTPMVYLNKIV--DGCVARIAAKLEMMEPCSSIKDRIA 52
>At5g28030.1 68418.m03376 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase [Brassica juncea] GI:2245144; contains Pfam
profile PF00291: Pyridoxal-phosphate dependent enzyme
Length = 323
Score = 75.8 bits (178), Expect = 2e-14
Identities = 37/82 (45%), Positives = 53/82 (64%)
Frame = -1
Query: 304 KMRVPQPWRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCI 125
K+ + +P + ++ M DAE KG++ PGKS ++E T GNTGIGLA A RGY+ I
Sbjct: 37 KLEMMEPCSSIKDRIAYSMIKDAEDKGLITPGKSTLIEATGGNTGIGLASIGASRGYKVI 96
Query: 124 IVLPEKMSDEKVNTLVALGAEI 59
+++P MS E+ L ALGAE+
Sbjct: 97 LLMPSTMSLERRIILRALGAEV 118
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = -2
Query: 399 VHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIA 256
+ +D+ +IGNTP+V L+K+ +G + AK E + P S+KDRIA
Sbjct: 7 IKNDVTELIGNTPMVYLNKIV--DGCVARIAAKLEMMEPCSSIKDRIA 52
>At3g03630.1 68416.m00366 cysteine synthase, chloroplast, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative identical to SP|O22682 Probable
cysteine synthase, chloroplast precursor {Arabidopsis
thaliana}, similar to SP|P31300 Cysteine synthase,
chloroplast precursor {Capsicum annuum}
Length = 404
Score = 73.7 bits (173), Expect = 6e-14
Identities = 36/88 (40%), Positives = 54/88 (61%)
Frame = -1
Query: 304 KMRVPQPWRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCI 125
K+ +P R + M +AE G + P K+V+VEPT+GNTG+G+A AA +GY+ I
Sbjct: 129 KLESMEPCRSVKDRIGLSMINEAENSGAITPRKTVLVEPTTGNTGLGIAFVAAAKGYKLI 188
Query: 124 IVLPEKMSDEKVNTLVALGAEIIRTPTE 41
+ +P ++ E+ L ALGAEI+ T E
Sbjct: 189 VTMPASINIERRMLLRALGAEIVLTNPE 216
Score = 37.1 bits (82), Expect = 0.007
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = -2
Query: 450 TLKDMPHIVRALDRNQKVHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSV 271
T+ + HI + N + D+ +IG+TP+V L+++ +G ++ AK E + P SV
Sbjct: 84 TVAEEQHIAESETVN--IAEDVTQLIGSTPMVYLNRVT--DGCLADIAAKLESMEPCRSV 139
Query: 270 KDRI 259
KDRI
Sbjct: 140 KDRI 143
>At3g61440.1 68416.m06881 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative identical to cysteine synthase
(EC 4.2.99.8) [Arabidopsis thaliana] GI:5824334;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 368
Score = 73.3 bits (172), Expect = 8e-14
Identities = 35/76 (46%), Positives = 52/76 (68%)
Frame = -1
Query: 277 IRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSD 98
I+ RP + M DAE+K ++ PGK+ ++EPTSGN GI LA AA++GYR I+ +P S
Sbjct: 89 IKDRP-AIAMIADAEKKKLIIPGKTTLIEPTSGNMGISLAFMAAMKGYRIIMTMPSYTSL 147
Query: 97 EKVNTLVALGAEIIRT 50
E+ T+ + GAE++ T
Sbjct: 148 ERRVTMRSFGAELVLT 163
>At1g55880.2 68414.m06409 pyridoxal-5'-phosphate-dependent enzyme,
beta family protein similar to SP|P50867 Cysteine
synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile PF00291:
Pyridoxal-phosphate dependent enzyme
Length = 348
Score = 58.8 bits (136), Expect = 2e-09
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = -2
Query: 399 VHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIA 256
+ + ++ IGNTPL++++ L + G CE+ KCEFLNPGGSVKDR+A
Sbjct: 40 MRNGLVDAIGNTPLIRINSLSEATG--CEILGKCEFLNPGGSVKDRVA 85
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = -1
Query: 253 RMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVA 74
++ +A + G L PG ++ E ++G+T I LA A G +C +V+P+ + EK + A
Sbjct: 87 KIIQEALESGKLFPG-GIVTEGSAGSTAISLATVAPAYGCKCHVVIPDDAAIEKSQIIEA 145
Query: 73 LGAEIIR 53
LGA + R
Sbjct: 146 LGASVER 152
>At1g55880.1 68414.m06408 pyridoxal-5'-phosphate-dependent enzyme,
beta family protein similar to SP|P50867 Cysteine
synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile PF00291:
Pyridoxal-phosphate dependent enzyme
Length = 421
Score = 58.8 bits (136), Expect = 2e-09
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = -2
Query: 399 VHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIA 256
+ + ++ IGNTPL++++ L + G CE+ KCEFLNPGGSVKDR+A
Sbjct: 40 MRNGLVDAIGNTPLIRINSLSEATG--CEILGKCEFLNPGGSVKDRVA 85
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = -1
Query: 253 RMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVA 74
++ +A + G L PG ++ E ++G+T I LA A G +C +V+P+ + EK + A
Sbjct: 87 KIIQEALESGKLFPG-GIVTEGSAGSTAISLATVAPAYGCKCHVVIPDDAAIEKSQIIEA 145
Query: 73 LGAEIIR 53
LGA + R
Sbjct: 146 LGASVER 152
>At4g11640.1 68417.m01861 serine racemase, putative similar to
serine racemase [Mus musculus] GI:6448865; contains Pfam
profile PF00291: Pyridoxal-phosphate dependent enzyme
Length = 346
Score = 34.3 bits (75), Expect = 0.046
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = -1
Query: 244 LDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVALGA 65
LDAEQ K V+ +SGN L+LAA ++G IV+P+ KV+ ++ G
Sbjct: 85 LDAEQAA-----KGVVTH-SSGNHAAALSLAAKIQGIPAYIVVPKGAPKCKVDNVIRYGG 138
Query: 64 EII 56
++I
Sbjct: 139 KVI 141
>At1g17910.1 68414.m02217 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 764
Score = 34.3 bits (75), Expect = 0.046
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 283 WRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGN---TGIGLALAAAVRGYR 131
W I+ + HSF LD + +G L GK + T N +G+G A A GY+
Sbjct: 277 WFIQTKNHSFLQSLDCQNRGELDKGKKRTRQCTCDNHIASGMGYASCACASGYK 330
>At5g58300.1 68418.m07298 leucine-rich repeat transmembrane protein
kinase, putative
Length = 654
Score = 30.7 bits (66), Expect = 0.57
Identities = 23/52 (44%), Positives = 28/52 (53%)
Frame = +3
Query: 63 SAPNATSVFTFSSDIFSGNTIMHLYPLTAAASASPIPVLPDVGSTMTDLPGF 218
S P+A F SS FSGNT++ PL A++SP P L ST LP F
Sbjct: 219 SIPSALGGFPSSS--FSGNTLLCGLPLQPCATSSPPPSLTPHIST-PPLPPF 267
>At5g35750.1 68418.m04281 histidine kinase (AHK2) identical to
histidine kinase AHK2 [Arabidopsis thaliana]
gi|13537196|dbj|BAB40774
Length = 1176
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 396 VPSDFDPVPLQCEACPLV*RIFSQSSMCH 482
VP +FDP P+Q E P+ IF+Q ++ H
Sbjct: 365 VPENFDPAPIQDEYAPV---IFAQETVSH 390
>At3g10050.1 68416.m01205 threonine ammonia-lyase / threonine
dehydratase / threonine deaminase (OMR1) identical to
SP|Q9ZSS6 Threonine dehydratase biosynthetic,
chloroplast precursor (EC 4.3.1.19, formerly EC
4.2.1.16) (Threonine deaminase) (TD) {Arabidopsis
thaliana}
Length = 592
Score = 29.1 bits (62), Expect = 1.7
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = -1
Query: 199 IVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVNTLVALGAEII 56
++ ++GN G+AL+A+ G +IV+P + K + LGA ++
Sbjct: 161 VICSSAGNHAQGVALSASKLGCTAVIVMPVTTPEIKWQAVENLGATVV 208
>At3g07140.2 68416.m00851 GPI transamidase component Gpi16 subunit
family protein similar to phosphatidyl inositol glycan
class T (GI:14456615) [Homo sapiens]; contains Pfam
profile PF04113: Gpi16 subunit, GPI transamidase
component
Length = 643
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -1
Query: 286 PWRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGL 161
PW I+ H+ ++F+D +QK + K + V P++ G+
Sbjct: 411 PWYIKVYYHTLQIFVDQQQKTDSEVLKKINVSPSTDKVSSGM 452
>At3g07140.1 68416.m00850 GPI transamidase component Gpi16 subunit
family protein similar to phosphatidyl inositol glycan
class T (GI:14456615) [Homo sapiens]; contains Pfam
profile PF04113: Gpi16 subunit, GPI transamidase
component
Length = 644
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -1
Query: 286 PWRIRQRPHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGL 161
PW I+ H+ ++F+D +QK + K + V P++ G+
Sbjct: 411 PWYIKVYYHTLQIFVDQQQKTDSEVLKKINVSPSTDKVSSGM 452
>At4g30990.1 68417.m04398 expressed protein ; expression supported by
MPSS
Length = 2138
Score = 28.3 bits (60), Expect = 3.0
Identities = 20/88 (22%), Positives = 39/88 (44%)
Frame = -1
Query: 265 PHSFRMFLDAEQKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVLPEKMSDEKVN 86
PH QK I+ P ++ S N + ++AA + + +LPE + D ++
Sbjct: 1560 PHEAEEIRTCLQK-IVFPRMQKLMNSDSDNVNVNSSVAAL----KVLKLLPEDVLDSNLS 1614
Query: 85 TLVALGAEIIRTPTEAAWDSPESNIIAC 2
++V A ++ E+ D ++AC
Sbjct: 1615 SIVHKIASFLKNRLESTRDEARLALVAC 1642
>At3g53360.1 68416.m05889 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 768
Score = 28.3 bits (60), Expect = 3.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 318 CEMYAKCEFLNPGGSVKDRI 259
C+MYA+C FLN V D+I
Sbjct: 312 CDMYARCGFLNSARRVFDQI 331
>At3g06060.1 68416.m00693 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198
short-chain dehydrogenase/reductase (SDR) superfamily
Length = 326
Score = 28.3 bits (60), Expect = 3.0
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = -1
Query: 187 TSGNTGIGLALA--AAVRGYRCIIVL--PEKMSDEKVNTLVALGAEI 59
T G++GIGLALA AA G R I+ K+ + K + +A G E+
Sbjct: 45 TGGSSGIGLALAHRAASEGARVSILARSGSKLEEAKKSIQLATGVEV 91
>At5g19200.1 68418.m02286 short-chain dehydrogenase/reductase (SDR)
family protein similar to follicular variant
translocation protein 1 precursor (FVT-1) SP:Q06136 from
[Homo sapiens]
Length = 331
Score = 27.9 bits (59), Expect = 4.0
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Frame = -1
Query: 187 TSGNTGIGLALA--AAVRGYRCIIVL--PEKMSDEKVNTLVALGAEI 59
T G++GIGLALA A G + I+ EK+++ K + +A G E+
Sbjct: 43 TGGSSGIGLALAHRAVSEGAKVSILARSTEKLAEAKRSIQLATGVEV 89
>At3g14980.1 68416.m01894 PHD finger transcription factor, putative
contains Pfam profile: PF00628 PHD-finger
Length = 1189
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 483 NGTSNSARKFFTLKDMPHIVRALDRNQKVHSDI 385
N S T+ + H+V +D NQ++HSD+
Sbjct: 389 NLISGCPESVLTVSEGSHLVHDVDANQEIHSDL 421
>At3g60400.1 68416.m06755 mitochondrial transcription termination
factor-related / mTERF-related contains Pfam profile
PF02536: mTERF
Length = 558
Score = 27.5 bits (58), Expect = 5.3
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = -2
Query: 447 LKDMPHIVRALDRNQKVHSDILXVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVK 268
LK++P+++RA+D ++++ DIL + L + + DE L+ E E L + +
Sbjct: 336 LKNLPYVLRAIDLHERIF-DILKNGNHHLLASYTLMDPDEDLEREYQEGLEELQNSRTKR 394
Query: 267 DRIASACF 244
I F
Sbjct: 395 HNIQKLDF 402
>At3g05340.1 68416.m00582 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 658
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 3 HAIMLLSGESQAASVGVRIISAPNATSVFTFSSDIFSGNTIMHLYPLTAAAS 158
HA+ +LSG + SVG ++I++ +F G + ++ LTA S
Sbjct: 178 HALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVIS 229
>At2g20970.1 68415.m02481 hypothetical protein
Length = 373
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 38 SFSWRADYFSTQCDKCVYFFI*HFLRQHYNAPVPSDSSGK 157
+F WR F + +Y F HFLR H P P K
Sbjct: 99 TFLWRLTVFLSVVIHSIYMFE-HFLRSHQVVPPPPPPQSK 137
>At2g36490.1 68415.m04479 HhH-GPD base excision DNA repair family
protein (ROS1) similar to DEMETER protein [Arabidopsis
thaliana] GI:21743571; contains Pfam profile PF00730:
HhH-GPD superfamily base excision DNA repair protein
Length = 1393
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = +3
Query: 72 NATSVFTFSSDIFSGNTIMHLYPLTAAASASPIPVLPDVGSTMTDLPGFKIP 227
N + + ++ GN L LTA ++ P+P L ++ T+ +++P
Sbjct: 1158 NLKKIMEHNKELQDGNMSSALVALTAETASLPMPKLKNISQLRTEHRVYELP 1209
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 51 VRIISAPNATSVFTFSSDIFSGNTIMHLYPLTAAASASPIPVL 179
V + PN T + + S I +G L P+ +S SP+PV+
Sbjct: 209 VSLTETPNRTGIASTISVINNGLISKPLTPVGTMSSTSPLPVV 251
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 51 VRIISAPNATSVFTFSSDIFSGNTIMHLYPLTAAASASPIPVL 179
V + PN T + + S I +G L P+ +S SP+PV+
Sbjct: 470 VSLTETPNRTGIASTISVINNGLISKPLTPVGTMSSTSPLPVV 512
>At3g07960.1 68416.m00973 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 715
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/44 (27%), Positives = 17/44 (38%)
Frame = -1
Query: 478 HIELCEKILYTKGHASHCKGTGSKSEGTFRYFXCNRKYTTGEVI 347
H+ CE L TK HC ++ R+ + TG I
Sbjct: 463 HVRACENTLVTKFFGLHCVKLTGTAQKKVRFVIMGNLFCTGHSI 506
>At2g29940.1 68415.m03642 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1426
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 277 IRQRPHSFRMFLDAEQKGILKPGKSVIV--EPTSGNTGIGLALA 152
I+ R H + D GI+KPG+ ++ P SG + + LALA
Sbjct: 166 IKPRKHKLNILKDIS--GIIKPGRMTLLLGPPGSGKSTLLLALA 207
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,154,311
Number of Sequences: 28952
Number of extensions: 265949
Number of successful extensions: 752
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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