Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0016
         (715 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g76965.1 68414.m08961 glycine-rich protein                          29   2.3  
At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to ...    29   4.0  
At5g42370.1 68418.m05159 expressed protein                             29   4.0  
At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic...    29   4.0  
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox...    28   5.3  
At5g37380.2 68418.m04492 DNAJ heat shock N-terminal domain-conta...    28   7.1  
At5g37380.1 68418.m04491 DNAJ heat shock N-terminal domain-conta...    28   7.1  
At2g02800.2 68415.m00225 protein kinase (APK2b) identical to pro...    28   7.1  
At2g02800.1 68415.m00224 protein kinase (APK2b) identical to pro...    28   7.1  
At5g60000.1 68418.m07524 hypothetical protein                          27   9.3  
At5g22390.1 68418.m02612 expressed protein                             27   9.3  

>At1g76965.1 68414.m08961 glycine-rich protein 
          Length = 158

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 460 PGTGRIRFPSKPDTPRSSEPILIPKLRIQFAD 365
           PG   + FP KP+ P    P  +P+L + F D
Sbjct: 93  PGAAIVVFPKKPEEPVKVVPTPMPQLNLFFGD 124


>At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to
           autophagy 7 [Arabidopsis thaliana] GI:19912147; contains
           Pfam profile PF00899: ThiF family
          Length = 697

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = -1

Query: 247 PQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRR 113
           P  ++G    CG  +V NH++LL +S+ L+      ++S  +R +
Sbjct: 42  PISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNK 86


>At5g42370.1 68418.m05159 expressed protein
          Length = 447

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -2

Query: 186 PFYRIPWNSNAQAEKKTLPGPLGGVFRPL-WVTPSNTR 76
           P Y +  +   Q+ +K +P PL  + R L W TPS  R
Sbjct: 285 PLYDVTSSGLVQSVEKVVPRPLRSIVRLLFWYTPSTMR 322


>At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical
           to low affinity calcium antiporter CAX2 (GI:1488267)
           [Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA)
           Family member PMID:11500563
          Length = 441

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = +1

Query: 49  SIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFC--LSVRVPWNPI 180
           S++   SL TS  +  PK P+++   S K  +FC  L++ +P+ P+
Sbjct: 41  SLMEQGSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPL 86


>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
           lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
           [Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
           thaliana]
          Length = 926

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 242 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 144
           +S +  P  R    ++PYLPS    G RTLR+K
Sbjct: 215 QSQKDHPSKRILFTNQPYLPSETPSGLRTLREK 247


>At5g37380.2 68418.m04492 DNAJ heat shock N-terminal
           domain-containing protein similar to SP|Q9QYI4 DnaJ
           homolog subfamily B member 12 {Mus musculus}; contains
           Pfam profile PF00226: DnaJ domain
          Length = 431

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 500 NSLKRT*RTNIDQTRHRTHPLPVQTRHAPVLRANPYSEVTDP 375
           N  K T  TN   T  R +P P Q  + P  + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190


>At5g37380.1 68418.m04491 DNAJ heat shock N-terminal
           domain-containing protein similar to SP|Q9QYI4 DnaJ
           homolog subfamily B member 12 {Mus musculus}; contains
           Pfam profile PF00226: DnaJ domain
          Length = 431

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 500 NSLKRT*RTNIDQTRHRTHPLPVQTRHAPVLRANPYSEVTDP 375
           N  K T  TN   T  R +P P Q  + P  + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190


>At2g02800.2 68415.m00225 protein kinase (APK2b) identical to
           protein kinase APK2b [Arabidopsis thaliana]
           gi|2852449|dbj|BAA24695
          Length = 426

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 469 STRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 350
           ST+PGTG     ++ D+PR S   ++ K   +++ D P LH
Sbjct: 368 STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408


>At2g02800.1 68415.m00224 protein kinase (APK2b) identical to
           protein kinase APK2b [Arabidopsis thaliana]
           gi|2852449|dbj|BAA24695
          Length = 426

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 469 STRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 350
           ST+PGTG     ++ D+PR S   ++ K   +++ D P LH
Sbjct: 368 STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408


>At5g60000.1 68418.m07524 hypothetical protein 
          Length = 149

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = -2

Query: 336 RGSSPWRPAADMGTNRRDISTYIPHLNFKVRREYPD-TAANAVLFAFRTISPFYRIPWNS 160
           +GS PW+P   +GT  R+    +    + +     D T +    F       FYR  WN+
Sbjct: 78  QGSRPWQPRTCIGTFYREAHFGMHETPYVLYNSDKDATESKNSCFVVVKDDGFYR--WNN 135

Query: 159 NAQAEKKTLP 130
           N +   K  P
Sbjct: 136 NKRIWDKVFP 145


>At5g22390.1 68418.m02612 expressed protein
          Length = 202

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 121 ERSGKSFLFCLSVRVPWNPIEG 186
           + S KSFL  LS   PWNP +G
Sbjct: 17  DNSPKSFLDTLSSSSPWNPSKG 38


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,866,240
Number of Sequences: 28952
Number of extensions: 378835
Number of successful extensions: 1148
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)