Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0015
(786 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF179181-1|ABN05284.1| 727|Homo sapiens LIM domain binding 3 pr... 31 3.6
AF276807-1|AAQ14316.1| 330|Homo sapiens Z-band alternatively sp... 31 3.6
AB014513-1|BAA31588.1| 734|Homo sapiens KIAA0613 protein protein. 31 3.6
BC093754-1|AAH93754.1| 587|Homo sapiens hypothetical protein LO... 31 6.2
BC093752-1|AAH93752.1| 587|Homo sapiens hypothetical protein LO... 31 6.2
AF131737-1|AAD20026.1| 587|Homo sapiens Unknown protein. 31 6.2
AC079353-1|AAY24034.1| 423|Homo sapiens unknown protein. 31 6.2
DQ314866-1|ABC40725.1| 409|Homo sapiens arrestin, beta 2 protein. 30 8.2
CR450310-1|CAG29306.1| 409|Homo sapiens ARRB2 protein. 30 8.2
BC067368-1|AAH67368.1| 409|Homo sapiens arrestin, beta 2 protein. 30 8.2
BC007427-1|AAH07427.1| 409|Homo sapiens arrestin, beta 2 protein. 30 8.2
AK097542-1|BAC05094.1| 406|Homo sapiens protein ( Homo sapiens ... 30 8.2
AF106941-1|AAC99468.1| 409|Homo sapiens beta-arrestin 2 protein. 30 8.2
AB209786-1|BAD93023.1| 410|Homo sapiens arrestin beta 2 isoform... 30 8.2
>EF179181-1|ABN05284.1| 727|Homo sapiens LIM domain binding 3
protein.
Length = 727
Score = 31.5 bits (68), Expect = 3.6
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Frame = -1
Query: 366 APVLRANPYSEVTDPICRLPLPTLFYRLEALH-LGDLLRYGYEPARHLHVHPSPEFSRSA 190
+P RA+P + T P R F R A L + G P L SPE A
Sbjct: 123 SPEARASPGTPGT-PELRPTFSPAFSRPSAFSSLAEASDPG-PPRASLRAKTSPE---GA 177
Query: 189 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKD 13
+ P + SS+ Y IG + TLR+ +++ + GLP +L KD
Sbjct: 178 RDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLPIKD 236
>AF276807-1|AAQ14316.1| 330|Homo sapiens Z-band alternatively
spliced PDZ-motif protein ZASP-4 protein.
Length = 330
Score = 31.5 bits (68), Expect = 3.6
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Frame = -1
Query: 366 APVLRANPYSEVTDPICRLPLPTLFYRLEALH-LGDLLRYGYEPARHLHVHPSPEFSRSA 190
+P RA+P + T P R F R A L + G P L SPE A
Sbjct: 123 SPEARASPGTPGT-PELRPTFSPAFSRPSAFSSLAEASDPG-PPRASLRAKTSPE---GA 177
Query: 189 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKD 13
+ P + SS+ Y IG + TLR+ +++ + GLP +L KD
Sbjct: 178 RDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLPIKD 236
>AB014513-1|BAA31588.1| 734|Homo sapiens KIAA0613 protein protein.
Length = 734
Score = 31.5 bits (68), Expect = 3.6
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Frame = -1
Query: 366 APVLRANPYSEVTDPICRLPLPTLFYRLEALH-LGDLLRYGYEPARHLHVHPSPEFSRSA 190
+P RA+P + T P R F R A L + G P L SPE A
Sbjct: 130 SPEARASPGTPGT-PELRPTFSPAFSRPSAFSSLAEASDPG-PPRASLRAKTSPE---GA 184
Query: 189 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKD 13
+ P + SS+ Y IG + TLR+ +++ + GLP +L KD
Sbjct: 185 RDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLPIKD 243
>BC093754-1|AAH93754.1| 587|Homo sapiens hypothetical protein
LOC51057 protein.
Length = 587
Score = 30.7 bits (66), Expect = 6.2
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 101 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 232
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>BC093752-1|AAH93752.1| 587|Homo sapiens hypothetical protein
LOC51057 protein.
Length = 587
Score = 30.7 bits (66), Expect = 6.2
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 101 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 232
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>AF131737-1|AAD20026.1| 587|Homo sapiens Unknown protein.
Length = 587
Score = 30.7 bits (66), Expect = 6.2
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 101 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 232
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>AC079353-1|AAY24034.1| 423|Homo sapiens unknown protein.
Length = 423
Score = 30.7 bits (66), Expect = 6.2
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 101 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 232
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>DQ314866-1|ABC40725.1| 409|Homo sapiens arrestin, beta 2 protein.
Length = 409
Score = 30.3 bits (65), Expect = 8.2
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 599 AHETKPTRLTARKIRGRPENAGPDP-VRNVRHF 504
+H+ RL RK++ PE GP P RHF
Sbjct: 159 SHKRNSVRLVIRKVQFAPEKPGPQPSAETTRHF 191
>CR450310-1|CAG29306.1| 409|Homo sapiens ARRB2 protein.
Length = 409
Score = 30.3 bits (65), Expect = 8.2
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 599 AHETKPTRLTARKIRGRPENAGPDP-VRNVRHF 504
+H+ RL RK++ PE GP P RHF
Sbjct: 159 SHKRNSVRLVIRKVQFAPEKPGPQPSAETTRHF 191
>BC067368-1|AAH67368.1| 409|Homo sapiens arrestin, beta 2 protein.
Length = 409
Score = 30.3 bits (65), Expect = 8.2
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 599 AHETKPTRLTARKIRGRPENAGPDP-VRNVRHF 504
+H+ RL RK++ PE GP P RHF
Sbjct: 159 SHKRNSVRLVIRKVQFAPEKPGPQPSAETTRHF 191
>BC007427-1|AAH07427.1| 409|Homo sapiens arrestin, beta 2 protein.
Length = 409
Score = 30.3 bits (65), Expect = 8.2
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 599 AHETKPTRLTARKIRGRPENAGPDP-VRNVRHF 504
+H+ RL RK++ PE GP P RHF
Sbjct: 159 SHKRNSVRLVIRKVQFAPEKPGPQPSAETTRHF 191
>AK097542-1|BAC05094.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ40223 fis, clone TESTI2021851, highly similar to
BETA-ARRESTIN 2. ).
Length = 406
Score = 30.3 bits (65), Expect = 8.2
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 599 AHETKPTRLTARKIRGRPENAGPDP-VRNVRHF 504
+H+ RL RK++ PE GP P RHF
Sbjct: 144 SHKRNSVRLVIRKVQFAPEKPGPQPSAETTRHF 176
>AF106941-1|AAC99468.1| 409|Homo sapiens beta-arrestin 2 protein.
Length = 409
Score = 30.3 bits (65), Expect = 8.2
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 599 AHETKPTRLTARKIRGRPENAGPDP-VRNVRHF 504
+H+ RL RK++ PE GP P RHF
Sbjct: 159 SHKRNSVRLVIRKVQFAPEKPGPQPSAETTRHF 191
>AB209786-1|BAD93023.1| 410|Homo sapiens arrestin beta 2 isoform 1
variant protein.
Length = 410
Score = 30.3 bits (65), Expect = 8.2
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 599 AHETKPTRLTARKIRGRPENAGPDP-VRNVRHF 504
+H+ RL RK++ PE GP P RHF
Sbjct: 160 SHKRNSVRLVIRKVQFAPEKPGPQPSAETTRHF 192
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,241,518
Number of Sequences: 237096
Number of extensions: 2659881
Number of successful extensions: 7481
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7481
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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