Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0015
         (786 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075453-1|AAL68266.1|  589|Drosophila melanogaster RE11411p pro...    31   1.8  
AE013599-1106|AAM68760.2|  589|Drosophila melanogaster CG18377-P...    31   1.8  
AE013599-1105|AAF58791.3|  589|Drosophila melanogaster CG18377-P...    31   1.8  
X55393-1|CAA39067.1|  659|Drosophila melanogaster S59 protein pr...    30   4.1  
AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p pro...    30   4.1  
AE014297-3018|AAF55901.3|  659|Drosophila melanogaster CG6534-PA...    30   4.1  
AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA...    30   4.1  
AE014296-1693|AAF50239.2| 1937|Drosophila melanogaster CG3280-PA...    29   9.5  

>AY075453-1|AAL68266.1|  589|Drosophila melanogaster RE11411p
           protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -1

Query: 423 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 295
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>AE013599-1106|AAM68760.2|  589|Drosophila melanogaster CG18377-PD,
           isoform D protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -1

Query: 423 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 295
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>AE013599-1105|AAF58791.3|  589|Drosophila melanogaster CG18377-PA,
           isoform A protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -1

Query: 423 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 295
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>X55393-1|CAA39067.1|  659|Drosophila melanogaster S59 protein
           protein.
          Length = 659

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 7/105 (6%)
 Frame = -1

Query: 417 IDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRYGYE- 241
           ++  RH   P P+Q  HA +L+ +P+              + +     H      + ++ 
Sbjct: 162 LNAVRHLARPEPLQHPHAALLQQHPHLLQNPQFLAAAQQHMHHHQHQHHQHPAHPHSHQH 221

Query: 240 ----PARHLHVHPSPEFSRSA--ESIRTPPQMRCSSRSEPYLPSI 124
               P  H H HPS  F   A   S   PP    S  S P  P++
Sbjct: 222 PHPHPHPHPHPHPSAVFHLRAPSSSSTAPPSPATSPLSPPTSPAM 266


>AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p
           protein.
          Length = 872

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 634 PLNGGRTESCRSRTK-RNRHDLRLGRSAEGRRTRVRIQS 521
           PL GGR+ S RSR++ R+R   R      GR TR  ++S
Sbjct: 674 PLKGGRSSSSRSRSRSRSRSRSRSRNRRLGRSTRSSLRS 712


>AE014297-3018|AAF55901.3|  659|Drosophila melanogaster CG6534-PA
           protein.
          Length = 659

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 7/105 (6%)
 Frame = -1

Query: 417 IDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRYGYE- 241
           ++  RH   P P+Q  HA +L+ +P+              + +     H      + ++ 
Sbjct: 162 LNAVRHLARPEPLQHPHAALLQQHPHLLQNPQFLAAAQQHMHHHQHQHHQHPAHPHSHQH 221

Query: 240 ----PARHLHVHPSPEFSRSA--ESIRTPPQMRCSSRSEPYLPSI 124
               P  H H HPS  F   A   S   PP    S  S P  P++
Sbjct: 222 PHPHPHPHPHPHPSAVFHLRAPSSSSTAPPSPATSPLSPPTSPAM 266


>AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA
           protein.
          Length = 872

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 634 PLNGGRTESCRSRTK-RNRHDLRLGRSAEGRRTRVRIQS 521
           PL GGR+ S RSR++ R+R   R      GR TR  ++S
Sbjct: 674 PLKGGRSSSSRSRSRSRSRSRSRSRNRRLGRSTRSSLRS 712


>AE014296-1693|AAF50239.2| 1937|Drosophila melanogaster CG3280-PA
           protein.
          Length = 1937

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 325 SNLPTSLTYIILSTRGSSPWRPAAIWVRTGATSPRTSLT 209
           + LPT+L   + ST  ++    ++IW  T  TSP T+ T
Sbjct: 673 TTLPTTLPTTLPSTLATTTATTSSIWSTTEETSPTTTTT 711


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,449,088
Number of Sequences: 53049
Number of extensions: 836056
Number of successful extensions: 2606
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2604
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)