Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0014
(562 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.0
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.4
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.4
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 21 5.5
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 5.5
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 21 7.2
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 21 7.2
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 21 7.2
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 21 7.2
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 21 7.2
DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc gr... 21 9.6
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +1
Query: 250 KNNLLITNSWPNC--NIFYIKFGECDF 324
KN +L TN+W N N + +K+ E ++
Sbjct: 46 KNQILTTNAWLNLEWNDYNLKWNESEY 72
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +1
Query: 250 KNNLLITNSWPNC--NIFYIKFGECDF 324
KN +L TN+W N N + +K+ E ++
Sbjct: 46 KNQILTTNAWLNLEWNDYNLKWNESEY 72
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +1
Query: 250 KNNLLITNSWPNC--NIFYIKFGECDF 324
KN +L TN+W N N + +K+ E ++
Sbjct: 46 KNQILTTNAWLNLEWNDYNLKWNESEY 72
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.4
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +1
Query: 250 KNNLLITNSWPNC--NIFYIKFGECDF 324
KN LLITN W + N + +K+ E ++
Sbjct: 46 KNQLLITNIWLSLEWNDYNLKWNESEY 72
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.4
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = +1
Query: 250 KNNLLITNSWPNC--NIFYIKFGECDF 324
KN LLITN W + N + +K+ E ++
Sbjct: 46 KNQLLITNIWLSLEWNDYNLKWNESEY 72
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = -2
Query: 396 IVQIWRLGLDKFIKNDLLVIKKKFKVTFPKFD 301
I+QIW G D ++N ++ ++V +D
Sbjct: 442 IIQIWTTGSDPQVRN---LLDNGYRVILSNYD 470
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 481 YILFHFVFVRLLKIHIF*FQISIFT 555
++LF+ V + LL I+ F + +FT
Sbjct: 225 HLLFYCVLIILLCIYYFYYAFILFT 249
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 405 SLIIVQIWRLGLDKFIKN 352
++II+ IW FIKN
Sbjct: 206 AIIIITIWSKNAKGFIKN 223
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 172 NYISKNYFCETNNEI 216
NYIS F TNN I
Sbjct: 448 NYISPEVFPNTNNAI 462
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 21.0 bits (42), Expect = 7.2
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +3
Query: 381 SKFAQLLETYENIIIILDELHTLSRYPDRVTCIIHTISFRFCSFI 515
S F +++ N+ I L S + TC+ +I++ C +I
Sbjct: 9 SDFHDVIKPLINLTKIFGFLPVCSSQKGQKTCLNLSINYCICGYI 53
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 21.0 bits (42), Expect = 7.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 23 LNVYYTRMKILTVSIYFQ 76
L+ +T + +LT+ +YFQ
Sbjct: 445 LDFIFTFITLLTIGLYFQ 462
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 172 NYISKNYFCETNNEI 216
NYIS F TNN I
Sbjct: 396 NYISPEVFPNTNNAI 410
>DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc
growth factor 4 protein.
Length = 431
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 353 FLINLSNPSLQICT 394
F +N +P+LQ CT
Sbjct: 38 FDVNFIDPALQFCT 51
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,601
Number of Sequences: 336
Number of extensions: 2741
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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