Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0011
         (733 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M71227-1|AAA36075.1|  120|Homo sapiens immunoglobulin heavy chai...    30   9.8  
AK022216-1|BAB13988.1|  538|Homo sapiens protein ( Homo sapiens ...    30   9.8  

>M71227-1|AAA36075.1|  120|Homo sapiens immunoglobulin heavy chain
           VDJC region protein.
          Length = 120

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 20/75 (26%), Positives = 29/75 (38%)
 Frame = +2

Query: 395 TRTNVWAFTQSKPIRKRIWSGWPCYAKT*QSGES*KIFMRCGLTKDSLKNIPREILHKIE 574
           + T  W + +  P R   W G   Y  T  +  +  +  R  +  D+ KN     LH + 
Sbjct: 23  SNTFAWNWIRQSPSRGLEWLGRTFYRSTWYNDYALSVRSRISIDPDTSKNQFSLQLHSVT 82

Query: 575 PEYCGVCALELDSFG 619
           PE   V     DS G
Sbjct: 83  PEDTAVYYCARDSVG 97


>AK022216-1|BAB13988.1|  538|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12154 fis, clone MAMMA1000468. ).
          Length = 538

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 190 KMNSREEYEMNEDCGWTEEPPSFREER*GITNTAMHLE 303
           ++ S EE  +NE   W   PP FR +R  +T    HL+
Sbjct: 425 ELMSDEEDSLNEPSVWVARPPRFRAQR--LTELCYHLD 460


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,331,180
Number of Sequences: 237096
Number of extensions: 2212435
Number of successful extensions: 4822
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4821
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)