Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0008
(702 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p pro... 32 0.87
AE014297-3139|AAN14374.2| 1304|Drosophila melanogaster CG31169-P... 32 0.87
AE014297-3138|AAF55983.2| 1469|Drosophila melanogaster CG31169-P... 32 0.87
BT025818-1|ABF85718.1| 1416|Drosophila melanogaster IP03271p pro... 31 1.1
BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p pro... 31 1.1
AF053358-1|AAC35280.1| 1383|Drosophila melanogaster guanine nucl... 31 1.1
AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,... 31 1.1
AE014298-951|AAO41635.1| 1520|Drosophila melanogaster CG3126-PB,... 31 1.1
BT003220-1|AAO24975.1| 513|Drosophila melanogaster RE02054p pro... 30 2.6
AY061284-1|AAL28832.1| 513|Drosophila melanogaster LD20239p pro... 30 2.6
AE013599-3047|AAF57443.3| 513|Drosophila melanogaster CG11175-P... 30 2.6
AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P... 30 3.5
BT011128-1|AAR82795.1| 1084|Drosophila melanogaster LD07113p pro... 29 6.1
>AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p protein.
Length = 1193
Score = 31.9 bits (69), Expect = 0.87
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = -3
Query: 244 SKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRR 92
SK EA + KD+ EP ES SK+ TS S SK+E++R+ RR
Sbjct: 942 SKTEAVIEPVAKDVSMAEPNESLHSKK--ETSPASLSKQESKRKQKRSLRR 990
>AE014297-3139|AAN14374.2| 1304|Drosophila melanogaster CG31169-PB,
isoform B protein.
Length = 1304
Score = 31.9 bits (69), Expect = 0.87
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = -3
Query: 244 SKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRR 92
SK EA + KD+ EP ES SK+ TS S SK+E++R+ RR
Sbjct: 1053 SKTEAVIEPVAKDVSMAEPNESLHSKK--ETSPASLSKQESKRKQKRSLRR 1101
>AE014297-3138|AAF55983.2| 1469|Drosophila melanogaster CG31169-PA,
isoform A protein.
Length = 1469
Score = 31.9 bits (69), Expect = 0.87
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = -3
Query: 244 SKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRR 92
SK EA + KD+ EP ES SK+ TS S SK+E++R+ RR
Sbjct: 1218 SKTEAVIEPVAKDVSMAEPNESLHSKK--ETSPASLSKQESKRKQKRSLRR 1266
>BT025818-1|ABF85718.1| 1416|Drosophila melanogaster IP03271p
protein.
Length = 1416
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 229 SLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 89
SL G D L+V R + QC F S ++HS+ E ++ RS
Sbjct: 498 SLLNYGVDRLSVRSRSPDENSQCSFDSALNHSREEEDQQQQHQHLRS 544
>BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p
protein.
Length = 1506
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 229 SLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 89
SL G D L+V R + QC F S ++HS+ E ++ RS
Sbjct: 602 SLLNYGVDRLSVRSRSPDENSQCSFDSALNHSREEEDQQQQHQHLRS 648
>AF053358-1|AAC35280.1| 1383|Drosophila melanogaster guanine
nucleotide exchange factorDC3G protein.
Length = 1383
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 229 SLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 89
SL G D L+V R + QC F S ++HS+ E ++ RS
Sbjct: 464 SLLNYGVDRLSVRSRSPDENSQCSFDSALNHSREEEDQQQQHQHLRS 510
>AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,
isoform A protein.
Length = 1571
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 229 SLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 89
SL G D L+V R + QC F S ++HS+ E ++ RS
Sbjct: 602 SLLNYGVDRLSVRSRSPDENSQCSFDSALNHSREEEDQQQQHQHLRS 648
>AE014298-951|AAO41635.1| 1520|Drosophila melanogaster CG3126-PB,
isoform B protein.
Length = 1520
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 229 SLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRS 89
SL G D L+V R + QC F S ++HS+ E ++ RS
Sbjct: 602 SLLNYGVDRLSVRSRSPDENSQCSFDSALNHSREEEDQQQQHQHLRS 648
>BT003220-1|AAO24975.1| 513|Drosophila melanogaster RE02054p
protein.
Length = 513
Score = 30.3 bits (65), Expect = 2.6
Identities = 25/97 (25%), Positives = 36/97 (37%)
Frame = +3
Query: 21 HRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTV 200
HR + DLR + +D D N ++ + + L SH PP GST
Sbjct: 285 HRAQSLMDLRCTLPGMYNPRHVLDTEDKNAKYFNITIDDLKNNLHDSHRPSPPSLIGSTS 344
Query: 201 SISLPDSARLASALEAFRIIPRMVASHHRPLGRVHEP 311
+ D + + P SHHRP G +P
Sbjct: 345 N----DPIYCSIEPKQLTPPPAQQRSHHRPRGTHKQP 377
>AY061284-1|AAL28832.1| 513|Drosophila melanogaster LD20239p
protein.
Length = 513
Score = 30.3 bits (65), Expect = 2.6
Identities = 25/97 (25%), Positives = 36/97 (37%)
Frame = +3
Query: 21 HRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTV 200
HR + DLR + +D D N ++ + + L SH PP GST
Sbjct: 285 HRAQSLMDLRCTLPGMYNPRHVLDTEDKNAKYFNITIDDLKNNLHDSHRPSPPSLIGSTS 344
Query: 201 SISLPDSARLASALEAFRIIPRMVASHHRPLGRVHEP 311
+ D + + P SHHRP G +P
Sbjct: 345 N----DPIYCSIEPKQLTPPPAQQRSHHRPRGTHKQP 377
>AE013599-3047|AAF57443.3| 513|Drosophila melanogaster CG11175-PA
protein.
Length = 513
Score = 30.3 bits (65), Expect = 2.6
Identities = 25/97 (25%), Positives = 36/97 (37%)
Frame = +3
Query: 21 HRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTV 200
HR + DLR + +D D N ++ + + L SH PP GST
Sbjct: 285 HRAQSLMDLRCTLPGMYNPRHVLDTEDKNAKYFNITIDDLKNNLHDSHRPSPPSLIGSTS 344
Query: 201 SISLPDSARLASALEAFRIIPRMVASHHRPLGRVHEP 311
+ D + + P SHHRP G +P
Sbjct: 345 N----DPIYCSIEPKQLTPPPAQQRSHHRPRGTHKQP 377
>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
protein.
Length = 1333
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 289 RSAECMNQMSETAVPLVLSSITIATTSHQ*G 381
+ EC Q+S ++ LV+S+IT+AT +H G
Sbjct: 701 QQCECHAQVSIASLLLVISAITVATNTHDYG 731
>BT011128-1|AAR82795.1| 1084|Drosophila melanogaster LD07113p protein.
Length = 1084
Score = 29.1 bits (62), Expect = 6.1
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -3
Query: 244 SKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRR 113
SK EA + KD+ EP ES SK+ TS S SK+E++++
Sbjct: 1040 SKTEAVIEPVAKDVSMAEPNESLHSKK--ETSPASLSKQESKKK 1081
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,877,322
Number of Sequences: 53049
Number of extensions: 654356
Number of successful extensions: 1623
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1623
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -