Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0006
         (564 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    31   0.020
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    30   0.060
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    30   0.060
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    26   0.98 
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   9.1  

>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 31.5 bits (68), Expect = 0.020
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 NYYGYTYLCVLCYVVKAYWIYCICFSSRHHQSSKTILK 444
           N YG T +  LCY +   +++CI F +R  + S +++K
Sbjct: 233 NVYGLTVIGYLCYALAQVFLFCI-FGNRLIEESSSVMK 269


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 0.060
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 NYYGYTYLCVLCYVVKAYWIYCICFSSRHHQSSKTILK 444
           N YG T +  LCY +   +++CI F +R  + S ++++
Sbjct: 380 NVYGLTVIGYLCYALAQVFLFCI-FGNRLIEESSSVME 416


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 0.060
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +1

Query: 331 NYYGYTYLCVLCYVVKAYWIYCICFSSRHHQSSKTILK 444
           N YG T +  LCY +   +++CI F +R  + S ++++
Sbjct: 380 NVYGLTVIGYLCYALAQVFLFCI-FGNRLIEESSSVME 416


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 25.8 bits (54), Expect = 0.98
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 339  RIHLFVRAMLRCQGILDLLYLFFVTS 416
            R+HLF    L C  +L L+  F +TS
Sbjct: 982  RVHLFTMIQLACFAVLWLIKSFSITS 1007


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 9.1
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +1

Query: 334 YYGYTYLCVLCYVVKAYWIYCICFSSRHHQSSKTILK 444
           Y+G     + C+VV  ++IY     S  ++    +LK
Sbjct: 559 YFGTASFAIPCFVVLTFFIYYYYAVSTANRHMVQVLK 595


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,708
Number of Sequences: 2352
Number of extensions: 10464
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)