Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0003
         (768 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    70   7e-11
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    44   0.004
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    40   0.068
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ...    40   0.068
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu...    36   1.5  
UniRef50_Q81WG4 Cluster: Cation-transporting ATPase, E1-E2 famil...    34   3.4  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 69.7 bits (163), Expect = 7e-11
 Identities = 36/46 (78%), Positives = 38/46 (82%)
 Frame = +2

Query: 509 TAAAGTRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG 646
           TAAAGTRLALQ  LVK FKV SF+L+GL RV Y YFSSLPPR GSG
Sbjct: 58  TAAAGTRLALQWILVKGFKVDSFQLQGLERVLYCYFSSLPPRVGSG 103


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +2

Query: 86  GKCFR*CSSCDDPRISPLTSQYECPQ 163
           GKCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284



 Score = 40.7 bits (91), Expect = 0.039
 Identities = 25/54 (46%), Positives = 28/54 (51%)
 Frame = +3

Query: 468 LTATILVYAIGAGIPRLLAPDLPSNCSSLKYLKCTHSDYEAS*ESRIVIFRHYL 629
           LTATIL+YAIGAGI       L       K L   HS+Y+      IVI  HYL
Sbjct: 314 LTATILIYAIGAGITAAAGTRLALQLIFGKVLSSHHSNYKTKIWPYIVISCHYL 367


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 39.9 bits (89), Expect = 0.068
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +1

Query: 589 PRKSPVSLFFVTTSPCREW 645
           PRKSPV LFFVTTSP REW
Sbjct: 24  PRKSPVLLFFVTTSPGREW 42


>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
          Predicted protein - Nematostella vectensis
          Length = 79

 Score = 39.9 bits (89), Expect = 0.068
 Identities = 18/23 (78%), Positives = 18/23 (78%)
 Frame = -2

Query: 77 FHQSRTKVRGSKAIRYRPSSNRK 9
          F   RTKVRGSK IRYRPSSN K
Sbjct: 6  FRCQRTKVRGSKTIRYRPSSNHK 28


>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
          lucimarinus CCE9901|Rep: Predicted protein -
          Ostreococcus lucimarinus CCE9901
          Length = 72

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 16/23 (69%), Positives = 16/23 (69%)
 Frame = -2

Query: 77 FHQSRTKVRGSKAIRYRPSSNRK 9
          FH  RTKV GSK IRY PS N K
Sbjct: 6  FHCQRTKVGGSKMIRYHPSLNHK 28


>UniRef50_Q81WG4 Cluster: Cation-transporting ATPase, E1-E2 family;
           n=26; Firmicutes|Rep: Cation-transporting ATPase, E1-E2
           family - Bacillus anthracis
          Length = 906

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 24/62 (38%), Positives = 32/62 (51%)
 Frame = -2

Query: 752 ATTMVVTGNGNQGSIPERKPEKRLTTSKEASSAQITHSRHGEVVTKNNDTGLLRGLVIGM 573
           A   +V  NG  G   ERK EK L   KE ++ Q+T  R+G+ V K     L+ G VI  
Sbjct: 82  AIVAIVIINGILGFFQERKAEKSLEALKELAAPQVTVLRNGKWV-KAPSKALVLGDVIKF 140

Query: 572 ST 567
           S+
Sbjct: 141 SS 142


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,953,736
Number of Sequences: 1657284
Number of extensions: 15951062
Number of successful extensions: 39740
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39727
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)