Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0003
         (768 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK223358-1|BAD97078.1|  403|Homo sapiens zinc finger, HIT domain...    31   6.0  
X80497-1|CAA56662.1| 1235|Homo sapiens phosphorylase kinase prot...    30   7.9  
D38616-1|BAA07606.1| 1235|Homo sapiens phosphorylase kinase alph...    30   7.9  
BC014036-1|AAH14036.1| 1235|Homo sapiens phosphorylase kinase, a...    30   7.9  
AL732509-6|CAI41680.1| 1235|Homo sapiens phosphorylase kinase, a...    30   7.9  
AL096700-4|CAB86408.2| 1235|Homo sapiens phosphorylase kinase, a...    30   7.9  
AF044572-1|AAD32846.1| 1235|Homo sapiens phosphorylase kinase al...    30   7.9  

>AK223358-1|BAD97078.1|  403|Homo sapiens zinc finger, HIT domain
           containing 2 variant protein.
          Length = 403

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = -1

Query: 714 FDSGEEA*ETAYHIQGSQQRANYPLPARGGSDEK*RYGTLTRPRNRNEYTLNIL 553
           F S EEA +TA H+  + +    PL  RG   E  R      P N+  YTL  L
Sbjct: 257 FASAEEALQTAAHVLEAGEHPPGPLGTRGAMHEVARILLGEGPTNQKGYTLAAL 310


>X80497-1|CAA56662.1| 1235|Homo sapiens phosphorylase kinase
           protein.
          Length = 1235

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 353 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 451
           LN+ +   R    +LRK+V + A+ACTD  +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848


>D38616-1|BAA07606.1| 1235|Homo sapiens phosphorylase kinase alpha
           subunit protein.
          Length = 1235

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 353 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 451
           LN+ +   R    +LRK+V + A+ACTD  +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848


>BC014036-1|AAH14036.1| 1235|Homo sapiens phosphorylase kinase,
           alpha 2 (liver) protein.
          Length = 1235

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 353 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 451
           LN+ +   R    +LRK+V + A+ACTD  +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848


>AL732509-6|CAI41680.1| 1235|Homo sapiens phosphorylase kinase,
           alpha 2 (liver) protein.
          Length = 1235

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 353 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 451
           LN+ +   R    +LRK+V + A+ACTD  +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848


>AL096700-4|CAB86408.2| 1235|Homo sapiens phosphorylase kinase,
           alpha 2 (liver) protein.
          Length = 1235

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 353 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 451
           LN+ +   R    +LRK+V + A+ACTD  +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848


>AF044572-1|AAD32846.1| 1235|Homo sapiens phosphorylase kinase alpha
           subunit protein.
          Length = 1235

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 353 LNRRFLERRLTDDMLRKRVSITADACTDSAAHK 451
           LN+ +   R    +LRK+V + A+ACTD  +H+
Sbjct: 816 LNQEWGLIRYISGLLRKKVEVLAEACTDLLSHQ 848


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,488,633
Number of Sequences: 237096
Number of extensions: 2347218
Number of successful extensions: 4833
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4832
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)