Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0002
         (406 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   1.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   4.6  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    20   8.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   8.0  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    20   8.0  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +3

Query: 213 IAPSRTTAPDLYVLN*LFSQSLHDEEFDFVEGY 311
           ++P+RT   DL+ +  +F   +HD +   +E +
Sbjct: 352 LSPNRTYYGDLHNMGHVFISYIHDPDHRHLESF 384


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +1

Query: 4   FFLFSDIYLCIECF 45
           FF+ + +Y+C +C+
Sbjct: 278 FFIVNVLYICNQCY 291


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 155 TRGERRSPRPP 123
           T+  RR PRPP
Sbjct: 258 TKVSRRKPRPP 268


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 7   FLFSDIYLCIECF 45
           F+F  I+LC  C+
Sbjct: 290 FIFDSIHLCDVCY 302


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 7   FLFSDIYLCIECF 45
           F+F  I+LC  C+
Sbjct: 308 FIFDSIHLCDVCY 320


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,571
Number of Sequences: 336
Number of extensions: 987
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)