Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0002
(406 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007307-1|AAP35971.1| 376|Homo sapiens proteasome (prosome, ma... 63 3e-10
BC001747-1|AAH01747.1| 376|Homo sapiens proteasome (prosome, ma... 63 3e-10
BC001100-1|AAH01100.1| 376|Homo sapiens proteasome (prosome, ma... 63 3e-10
AK222895-1|BAD96615.1| 376|Homo sapiens proteasome 26S non-ATPa... 63 3e-10
AF107837-1|AAD43442.1| 376|Homo sapiens 26S proteasome subunit ... 63 3e-10
AF107836-1|AAD43441.1| 160|Homo sapiens 26S proteasome subunit ... 63 3e-10
AF086708-1|AAC64104.1| 376|Homo sapiens 26S proteasome subunit ... 63 3e-10
AB009398-1|BAA33214.1| 376|Homo sapiens 26S proteasome subunit ... 63 3e-10
BC113597-1|AAI13598.1| 241|Homo sapiens proline rich 10 protein. 29 7.8
BC113593-1|AAI13594.1| 241|Homo sapiens proline rich 10 protein. 29 7.8
AK222564-1|BAD96284.1| 374|Homo sapiens dendritic cell protein ... 29 7.8
AK126552-1|BAC86588.1| 217|Homo sapiens protein ( Homo sapiens ... 29 7.8
AK097543-1|BAC05095.1| 241|Homo sapiens protein ( Homo sapiens ... 29 7.8
>BT007307-1|AAP35971.1| 376|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 13 protein.
Length = 376
Score = 63.3 bits (147), Expect = 3e-10
Identities = 28/51 (54%), Positives = 42/51 (82%)
Frame = -3
Query: 404 KIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIE 252
KI +LCLMEM F + ++ R+L+FEEIA+ A+I ++EVELL+MKAL+ L++
Sbjct: 271 KIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVK 321
>BC001747-1|AAH01747.1| 376|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 13 protein.
Length = 376
Score = 63.3 bits (147), Expect = 3e-10
Identities = 28/51 (54%), Positives = 42/51 (82%)
Frame = -3
Query: 404 KIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIE 252
KI +LCLMEM F + ++ R+L+FEEIA+ A+I ++EVELL+MKAL+ L++
Sbjct: 271 KIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVK 321
>BC001100-1|AAH01100.1| 376|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 13 protein.
Length = 376
Score = 63.3 bits (147), Expect = 3e-10
Identities = 28/51 (54%), Positives = 42/51 (82%)
Frame = -3
Query: 404 KIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIE 252
KI +LCLMEM F + ++ R+L+FEEIA+ A+I ++EVELL+MKAL+ L++
Sbjct: 271 KIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVK 321
>AK222895-1|BAD96615.1| 376|Homo sapiens proteasome 26S non-ATPase
subunit 13 isoform 1 variant protein.
Length = 376
Score = 63.3 bits (147), Expect = 3e-10
Identities = 28/51 (54%), Positives = 42/51 (82%)
Frame = -3
Query: 404 KIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIE 252
KI +LCLMEM F + ++ R+L+FEEIA+ A+I ++EVELL+MKAL+ L++
Sbjct: 271 KIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVK 321
>AF107837-1|AAD43442.1| 376|Homo sapiens 26S proteasome subunit
p40.5 protein.
Length = 376
Score = 63.3 bits (147), Expect = 3e-10
Identities = 28/51 (54%), Positives = 42/51 (82%)
Frame = -3
Query: 404 KIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIE 252
KI +LCLMEM F + ++ R+L+FEEIA+ A+I ++EVELL+MKAL+ L++
Sbjct: 271 KIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVK 321
>AF107836-1|AAD43441.1| 160|Homo sapiens 26S proteasome subunit
p40.5 protein.
Length = 160
Score = 63.3 bits (147), Expect = 3e-10
Identities = 28/51 (54%), Positives = 42/51 (82%)
Frame = -3
Query: 404 KIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIE 252
KI +LCLMEM F + ++ R+L+FEEIA+ A+I ++EVELL+MKAL+ L++
Sbjct: 85 KIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVK 135
>AF086708-1|AAC64104.1| 376|Homo sapiens 26S proteasome subunit 11
protein.
Length = 376
Score = 63.3 bits (147), Expect = 3e-10
Identities = 28/51 (54%), Positives = 42/51 (82%)
Frame = -3
Query: 404 KIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIE 252
KI +LCLMEM F + ++ R+L+FEEIA+ A+I ++EVELL+MKAL+ L++
Sbjct: 271 KIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVK 321
>AB009398-1|BAA33214.1| 376|Homo sapiens 26S proteasome subunit
p40.5 protein.
Length = 376
Score = 63.3 bits (147), Expect = 3e-10
Identities = 28/51 (54%), Positives = 42/51 (82%)
Frame = -3
Query: 404 KIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLIE 252
KI +LCLMEM F + ++ R+L+FEEIA+ A+I ++EVELL+MKAL+ L++
Sbjct: 271 KIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVK 321
>BC113597-1|AAI13598.1| 241|Homo sapiens proline rich 10 protein.
Length = 241
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 161 GWTRGERRSPRPPTCWLPCSPTSSSL 84
GW R +RR+ P PCSP SL
Sbjct: 163 GWPRSDRRARLPRKASKPCSPALPSL 188
>BC113593-1|AAI13594.1| 241|Homo sapiens proline rich 10 protein.
Length = 241
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 161 GWTRGERRSPRPPTCWLPCSPTSSSL 84
GW R +RR+ P PCSP SL
Sbjct: 163 GWPRSDRRARLPRKASKPCSPALPSL 188
>AK222564-1|BAD96284.1| 374|Homo sapiens dendritic cell protein
variant protein.
Length = 374
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = -3
Query: 404 KIAILCLMEMAFNKSSSQRKLSFEEIAREARIPLDEVELLIMKALAEKLI 255
K+ +L M MA +++SF+ + +E +I D+VE ++ A+ K++
Sbjct: 276 KMRLLTFMGMAVEN----KEISFDTVQQELQIGADDVEAFVIDAVRTKMV 321
>AK126552-1|BAC86588.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ44588 fis, clone ASTRO3000154, highly similar
to Jumonji protein. ).
Length = 217
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 406 RKLRFCA*WRWPSINPHLRGSCRSRR*PVKPEY 308
++L C+ WPS+ P +R S R P P Y
Sbjct: 170 QRLSLCSAHAWPSLGPAVRPSSLGSRWPPSPPY 202
>AK097543-1|BAC05095.1| 241|Homo sapiens protein ( Homo sapiens
cDNA FLJ40224 fis, clone TESTI2022010. ).
Length = 241
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 161 GWTRGERRSPRPPTCWLPCSPTSSSL 84
GW R +RR+ P PCSP SL
Sbjct: 163 GWPRSDRRARLPRKASKPCSPALPSL 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,162,680
Number of Sequences: 237096
Number of extensions: 682010
Number of successful extensions: 2070
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2070
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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