Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf2496
         (1046 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10; Eukaryo...    42   0.020
UniRef50_Q1JTI0 Cluster: Putative uncharacterized protein; n=1; ...    36   1.7  
UniRef50_A0HAB9 Cluster: Putative uncharacterized protein precur...    36   2.3  
UniRef50_A5AX63 Cluster: Putative uncharacterized protein; n=1; ...    35   4.0  
UniRef50_Q7RN96 Cluster: Putative senescence-associated protein;...    33   9.3  

>UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10;
           Eukaryota|Rep: Cytochrome P450 like_TBP - Nicotiana
           tabacum (Common tobacco)
          Length = 530

 Score = 42.3 bits (95), Expect = 0.020
 Identities = 20/28 (71%), Positives = 21/28 (75%)
 Frame = +3

Query: 411 REGHRNALFXLDSRIPLXRASSELTVER 494
           R  HRNALF L+SRIPL R SSEL V R
Sbjct: 151 RRDHRNALFKLNSRIPLVRTSSELAVRR 178


>UniRef50_Q1JTI0 Cluster: Putative uncharacterized protein; n=1;
           Toxoplasma gondii RH|Rep: Putative uncharacterized
           protein - Toxoplasma gondii RH
          Length = 1056

 Score = 35.9 bits (79), Expect = 1.7
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +1

Query: 154 ESGKXMLTVEPRESGGSKQCDFTSRVSHSKRETRVEAHLDRGDR 285
           E G+      PRESG  ++ D T   +  +RET+VEA   R D+
Sbjct: 348 EKGEESGCTTPRESGEERESDETKEQTRRRRETKVEARKGRSDQ 391


>UniRef50_A0HAB9 Cluster: Putative uncharacterized protein
           precursor; n=1; Comamonas testosteroni KF-1|Rep:
           Putative uncharacterized protein precursor - Comamonas
           testosteroni KF-1
          Length = 426

 Score = 35.5 bits (78), Expect = 2.3
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +3

Query: 30  AGRL*RIPRTXXSCTRPSGRWCXLTIRGIMPERL*GRSQ 146
           +G+L   P T  S  +PSGRW    + G+ P RL GR Q
Sbjct: 87  SGQLTETPMTGASDPKPSGRWSLAALPGMAPPRLQGRWQ 125


>UniRef50_A5AX63 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 421

 Score = 34.7 bits (76), Expect = 4.0
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = -3

Query: 447 CLXKTKHCDGPRGC*RNVIS 388
           CL K K+C+GP GC RNVIS
Sbjct: 367 CLAKIKNCNGPCGCSRNVIS 386


>UniRef50_Q7RN96 Cluster: Putative senescence-associated protein;
           n=3; Eukaryota|Rep: Putative senescence-associated
           protein - Plasmodium yoelii yoelii
          Length = 205

 Score = 33.5 bits (73), Expect = 9.3
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = +2

Query: 416 GPSQCFVXIRQSDSPXPCQF 475
           G SQC+V I+QSDSP P QF
Sbjct: 186 GFSQCYVLIKQSDSPCPFQF 205


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 814,265,355
Number of Sequences: 1657284
Number of extensions: 14060896
Number of successful extensions: 27956
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27874
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 100838077769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)