Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf2496
         (1046 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034604-1|AAH34604.1|  753|Homo sapiens striatin, calmodulin bi...    31   9.2  
BC004910-1|AAH04910.2|  349|Homo sapiens STRN4 protein protein.        31   9.2  
AF212940-1|AAF29527.1|  753|Homo sapiens zinedin protein.              31   9.2  
AB209003-1|BAD92240.1|  755|Homo sapiens Zinedin variant protein.      31   9.2  

>BC034604-1|AAH34604.1|  753|Homo sapiens striatin, calmodulin
           binding protein 4 protein.
          Length = 753

 Score = 30.7 bits (66), Expect = 9.2
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +1

Query: 154 ESGKXMLTVEPRESGGSKQCDFTSRVSHSKRETRVEAHLDRGDR 285
           E G  +LT+E R S G  Q +    VSH  +   + AH DRG R
Sbjct: 621 EVGSALLTLESRGSSGPTQINQV--VSHPNQPLTITAHDDRGIR 662


>BC004910-1|AAH04910.2|  349|Homo sapiens STRN4 protein protein.
          Length = 349

 Score = 30.7 bits (66), Expect = 9.2
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +1

Query: 154 ESGKXMLTVEPRESGGSKQCDFTSRVSHSKRETRVEAHLDRGDR 285
           E G  +LT+E R S G  Q +    VSH  +   + AH DRG R
Sbjct: 217 EVGSALLTLESRGSSGPTQINQV--VSHPNQPLTITAHDDRGIR 258


>AF212940-1|AAF29527.1|  753|Homo sapiens zinedin protein.
          Length = 753

 Score = 30.7 bits (66), Expect = 9.2
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +1

Query: 154 ESGKXMLTVEPRESGGSKQCDFTSRVSHSKRETRVEAHLDRGDR 285
           E G  +LT+E R S G  Q +    VSH  +   + AH DRG R
Sbjct: 621 EVGSALLTLESRGSSGPTQINQV--VSHPNQPLTITAHDDRGIR 662


>AB209003-1|BAD92240.1|  755|Homo sapiens Zinedin variant protein.
          Length = 755

 Score = 30.7 bits (66), Expect = 9.2
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +1

Query: 154 ESGKXMLTVEPRESGGSKQCDFTSRVSHSKRETRVEAHLDRGDR 285
           E G  +LT+E R S G  Q +    VSH  +   + AH DRG R
Sbjct: 623 EVGSALLTLESRGSSGPTQINQV--VSHPNQPLTITAHDDRGIR 664


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,291,750
Number of Sequences: 237096
Number of extensions: 2170134
Number of successful extensions: 4704
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4646
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14207814782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)