Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1128
         (596 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8A5N4 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_Q11VU8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  

>UniRef50_Q8A5N4 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides thetaiotaomicron|Rep: Putative
           uncharacterized protein - Bacteroides thetaiotaomicron
          Length = 857

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = -2

Query: 148 SLQLYQTGELPAYTVSKFKFDTERSVRSFVEYFYMYM 38
           SLQ++Q GE+P +T   F+   E S+R F  + Y+++
Sbjct: 38  SLQIFQEGEIPCFT-KNFQLSFELSIRDFDTFGYVFL 73


>UniRef50_Q11VU8 Cluster: Putative uncharacterized protein; n=1;
            Cytophaga hutchinsonii ATCC 33406|Rep: Putative
            uncharacterized protein - Cytophaga hutchinsonii (strain
            ATCC 33406 / NCIMB 9469)
          Length = 1807

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -2

Query: 157  FLLSLQLYQTGELPAY-TVSKFKFDTERSVRSFVEYFYMYMR 35
            +LL+    +TG+  +Y T+S   FD E+S+ SF   +Y Y+R
Sbjct: 1506 YLLASTYLRTGDQGSYRTLSPKSFDNEKSINSFGGSYYSYVR 1547


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,927,236
Number of Sequences: 1657284
Number of extensions: 10179198
Number of successful extensions: 21978
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21976
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)