Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1120
         (551 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   2.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   4.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   9.5  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   9.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   9.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   9.5  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 270 IHALFSRGDFRSIEGVLLAKIPHDWADYEP 359
           +HAL  + + R  E  + A  P+   +Y+P
Sbjct: 430 LHALSDKPELRPFEPAVTAVQPYQDQEYQP 459


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -3

Query: 306 LNGSLLSRITHEYQCRCP 253
           LNG+     T  Y C CP
Sbjct: 71  LNGATCQDHTTHYTCHCP 88



 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/18 (33%), Positives = 9/18 (50%)
 Frame = -3

Query: 303 NGSLLSRITHEYQCRCPR 250
           NG     +   Y C+CP+
Sbjct: 195 NGGTCLDLIGSYSCKCPK 212


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 411 SFHQDTSGYNFRH 373
           SFH D +GY  R+
Sbjct: 190 SFHHDAAGYGLRN 202


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/22 (27%), Positives = 10/22 (45%)
 Frame = -3

Query: 396 TSGYNFRHLQHYLVHNRPNHEE 331
           T   N  H+ H++    P H +
Sbjct: 159 TQSMNNHHMGHHMQEQHPQHHQ 180


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/22 (27%), Positives = 10/22 (45%)
 Frame = -3

Query: 396 TSGYNFRHLQHYLVHNRPNHEE 331
           T   N  H+ H++    P H +
Sbjct: 161 TQSMNNHHMGHHMQEQHPQHHQ 182


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/32 (25%), Positives = 20/32 (62%)
 Frame = +3

Query: 102 YQRVVEASGDSSYLARGSIKMSFGRICIGFTS 197
           ++  V+ +G  ++ + G+ +++FGR   GF +
Sbjct: 391 FRNAVQGTGIENWWSDGNQQIAFGRGNKGFVA 422


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/32 (25%), Positives = 20/32 (62%)
 Frame = +3

Query: 102 YQRVVEASGDSSYLARGSIKMSFGRICIGFTS 197
           ++  V+ +G  ++ + G+ +++FGR   GF +
Sbjct: 392 FRNAVQGTGIENWWSDGNQQIAFGRGNKGFVA 423


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 383 IFVTSSIIWFII 348
           I++TS  IWFI+
Sbjct: 44  IYLTSLYIWFIL 55


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 383 IFVTSSIIWFII 348
           I++TS  IWFI+
Sbjct: 44  IYLTSLYIWFIL 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,187
Number of Sequences: 336
Number of extensions: 2916
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)