Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1120
         (551 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    27   0.31 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   1.7  
AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    25   2.2  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    23   8.8  
AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione S-tran...    23   8.8  
AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione S-tran...    23   8.8  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 27.5 bits (58), Expect = 0.31
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
 Frame = -3

Query: 516 RVYHCLHCHR--KT*QQLKSFSYSKRTGT--YQCN*HRRSFHQDTSGYNFRHLQHYLVHN 349
           R + C+ C R  KT   L++   +  TGT  ++C      F   TSG   RH+++   H 
Sbjct: 153 RPHKCVVCERGFKTLASLQNH-VNTHTGTKPHRCKHCDNCF--TTSGELIRHIRYRHTHE 209

Query: 348 RPN---HEEFLPVELLQLNGSLLSRITHEYQCRCP 253
           RP+     ++  VEL +L   + +  T E   +CP
Sbjct: 210 RPHKCTECDYASVELSKLKRHIRTH-TGEKPFQCP 243


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +1

Query: 127 EIPAIWQEARLRCHLEGS-VLASPLDAALKSSMLSLITNKKSSWASTLVFMRYSREETSV 303
           E PA  Q       + G+ V+A P+DA   + +++ + N  +   + L  +R  REE + 
Sbjct: 74  EPPAAAQPTPTASPVPGNMVVAGPIDAGSCALLMAQLQNIGAQLTTALEELRLCREENAA 133

Query: 304 QLKE 315
             +E
Sbjct: 134 LRRE 137


>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 77  RNCWPTTEQIRINP 36
           RNCWP    + +NP
Sbjct: 193 RNCWPKVRGVAMNP 206


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 12/53 (22%), Positives = 25/53 (47%)
 Frame = +1

Query: 202 AALKSSMLSLITNKKSSWASTLVFMRYSREETSVQLKEFYWQKFLMIGPIMNQ 360
           AA  ++M +  T KKS+  + +  +   +     +L    WQ  +++  + NQ
Sbjct: 279 AATAAAMTTTTTTKKSTPPNAIPALSVRKPSDRAKLSPDAWQLEIILEGLYNQ 331


>AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione
           S-transferase S1-2 protein.
          Length = 195

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +3

Query: 360 DNAGGDENCILMYPDGSFADVNCTDTFQYVCYKKKTSTVA 479
           D+   D N  L     S+AD+  T    Y+ Y  K+  VA
Sbjct: 126 DDIARDNNGYLANSKLSWADIYFTAILDYLNYMTKSDLVA 165


>AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione
           S-transferase D5 protein.
          Length = 216

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 13  AANKSLVFGLILICSVVGQQ-FRYDYTYFRNINGWLK 120
           AA+   +  + ++ S+   + FRYD   +  I GW++
Sbjct: 147 AADHLTLADIFMLGSITALEWFRYDLERYPGIRGWVE 183


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,947
Number of Sequences: 2352
Number of extensions: 12419
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)