Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1120
         (551 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical pr...    38   0.006
AL031627-2|CAA20953.1|  179|Caenorhabditis elegans Hypothetical ...    34   0.059
AL031627-8|CAA20960.2|  222|Caenorhabditis elegans Hypothetical ...    33   0.10 
U64848-13|AAY86245.1|  339|Caenorhabditis elegans Hypothetical p...    31   0.55 
AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical ...    29   2.2  
Z81542-2|CAB04416.1|  228|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AC006663-2|AAF39900.2|  603|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z99281-28|CAB16503.1|  633|Caenorhabditis elegans Hypothetical p...    28   5.1  
U29378-10|AAP40541.1|  975|Caenorhabditis elegans Adamts family ...    27   6.8  
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p...    27   6.8  
AF040661-1|AAK82922.2|  508|Caenorhabditis elegans Hypothetical ...    27   6.8  
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p...    27   6.8  
Z83221-4|CAB05704.1|  298|Caenorhabditis elegans Hypothetical pr...    27   9.0  
AF016671-2|AAB66113.1|  168|Caenorhabditis elegans Hypothetical ...    27   9.0  

>U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical
           protein K02F3.5 protein.
          Length = 308

 Score = 37.5 bits (83), Expect = 0.006
 Identities = 19/67 (28%), Positives = 33/67 (49%)
 Frame = +3

Query: 261 YTGIHALFSRGDFRSIEGVLLAKIPHDWADYEPDNAGGDENCILMYPDGSFADVNCTDTF 440
           + G++ +     FR+ +G  +    + W   +PDN   +ENC+ +   G + D  C  T 
Sbjct: 243 WIGVNDIQKENVFRNSDGTPVDF--YKWGKKQPDNQEHNENCVEVDHSGQWTDKLCIITR 300

Query: 441 QYVCYKK 461
            +VC KK
Sbjct: 301 PFVCKKK 307


>AL031627-2|CAA20953.1|  179|Caenorhabditis elegans Hypothetical
           protein Y102A5C.7 protein.
          Length = 179

 Score = 34.3 bits (75), Expect = 0.059
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 354 EPDNAGGDENCILMYPDGSFADVNC--TDTFQYVCYK 458
           EP+N GG E C+++   G  +D  C  TD   YVC K
Sbjct: 140 EPNNVGGTEQCLVLTWTGLMSDQTCARTDYVGYVCGK 176


>AL031627-8|CAA20960.2|  222|Caenorhabditis elegans Hypothetical
           protein Y102A5C.17 protein.
          Length = 222

 Score = 33.5 bits (73), Expect = 0.10
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +3

Query: 354 EPDNAGGDENCILMYPDGSFADVNC--TDTFQYVCYK 458
           EP+N GG E C+++   G  +D  C  TD   YVC K
Sbjct: 183 EPNNVGGMEQCLVLTWTGLMSDQTCARTDYVGYVCGK 219


>U64848-13|AAY86245.1|  339|Caenorhabditis elegans Hypothetical
           protein C50E3.15 protein.
          Length = 339

 Score = 31.1 bits (67), Expect = 0.55
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +3

Query: 327 KIPHDWADYEPDNAGGDENCILMY--PDGSFADVNCTDTFQYVCYKKKTSTVAMSSCGSV 500
           K  ++W D EP+  GG   C+ +Y  PD         D   YV + K   +  +   GSV
Sbjct: 153 KAGYNWDDGEPNGIGGRRFCLYLYIEPDIKSEMHGKVDDTAYVAFWKPNESCYLCEWGSV 212


>AL031627-7|CAA20959.2|  200|Caenorhabditis elegans Hypothetical
           protein Y102A5C.16 protein.
          Length = 200

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +3

Query: 354 EPDNAGGDENCILMYPDGSFADVNCT--DTFQYVCYKK 461
           EP+N   +E+C+LM   G  +D  CT  D   +VC K+
Sbjct: 161 EPNNGSLNEHCLLMNWQGFMSDQFCTIPDYTGWVCGKR 198


>Z81542-2|CAB04416.1|  228|Caenorhabditis elegans Hypothetical
           protein F49A5.3 protein.
          Length = 228

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = +3

Query: 336 HDWADYEPDNAGGDENCILMYPDGS----FADVNCTDTFQYVC 452
           H++A+  P+N  GD  CI     G+    +A+ +CT+T  +VC
Sbjct: 59  HNFAEDHPNNEYGD--CIYYMTTGTQAGNWANGSCTETMSFVC 99


>AC006663-2|AAF39900.2|  603|Caenorhabditis elegans Hypothetical
           protein H24K24.4 protein.
          Length = 603

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 171 GRICIGFTSGRCFKKQHAV 227
           G IC+GF  GR  K QH V
Sbjct: 200 GEICVGFVGGRFSKNQHFV 218


>Z99281-28|CAB16503.1|  633|Caenorhabditis elegans Hypothetical
           protein Y57G11C.1 protein.
          Length = 633

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
 Frame = +1

Query: 211 KSSMLSLITNKKSSWASTLVFMRYSREETSVQLKEFYWQKFLMIGPIMNQIMLEVTKIVS 390
           KS   S + N  +  A  +V      EE  + L E  W+   + G      +   T ++ 
Sbjct: 7   KSVPFSDLININTGAAGEIVDKNDDEEENRLPLSEHLWEIVKLCGKQWRWFVPAYTLLIL 66

Query: 391 *CILMEASP-----MLIALIRSSTFAIRKRLQLLLCL 486
            C L    P     M+   I+  +F I KR  LLL L
Sbjct: 67  DCALNLIEPALYGQMMTNAIQMKSFDIIKRACLLLAL 103


>U29378-10|AAP40541.1|  975|Caenorhabditis elegans Adamts family
           protein 2, isoform c protein.
          Length = 975

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -3

Query: 408 FHQDTSGYNFRHLQHYLVHNRPNHEEFLPVELLQLNGSL 292
           F++D   Y F    H  V   PNHEE  PV     NGSL
Sbjct: 22  FNEDDLKYTFGVDTHAEV---PNHEEIDPVPYYHQNGSL 57


>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
           protein 2, isoform a protein.
          Length = 1020

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -3

Query: 408 FHQDTSGYNFRHLQHYLVHNRPNHEEFLPVELLQLNGSL 292
           F++D   Y F    H  V   PNHEE  PV     NGSL
Sbjct: 22  FNEDDLKYTFGVDTHAEV---PNHEEIDPVPYYHQNGSL 57


>AF040661-1|AAK82922.2|  508|Caenorhabditis elegans Hypothetical
           protein W10G11.19 protein.
          Length = 508

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +1

Query: 232 ITNKKSSWASTLVFMRYSREETSVQLKEFYWQKFLMIGPI 351
           + N    W S LVF +++ +   VQ+    W+  ++  P+
Sbjct: 45  VANSNRFWTSNLVFQQHNEKIDRVQISSESWKSAVIEEPV 84


>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
           protease protein.
          Length = 1020

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = -3

Query: 408 FHQDTSGYNFRHLQHYLVHNRPNHEEFLPVELLQLNGSL 292
           F++D   Y F    H  V   PNHEE  PV     NGSL
Sbjct: 22  FNEDDLKYTFGVDTHAEV---PNHEEIDPVPYYHQNGSL 57


>Z83221-4|CAB05704.1|  298|Caenorhabditis elegans Hypothetical
           protein C49A1.6 protein.
          Length = 298

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
 Frame = +3

Query: 303 SIEGVLLAKIPHDWADYEP----DNAGGDENCIL 392
           +I   L++ I ++W DYEP    DN  G  NCI+
Sbjct: 251 TITDPLISTISYNWGDYEPSGMIDNQ-GTSNCIV 283


>AF016671-2|AAB66113.1|  168|Caenorhabditis elegans Hypothetical
           protein W09G10.5 protein.
          Length = 168

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
 Frame = +3

Query: 342 WADYEPDNAGGDENCILMYPDGSFADVNCTD--TFQYVCYKKKT 467
           W   EP+N GG     L+       DV CT   T  YVC K  T
Sbjct: 124 WNSGEPNNQGGQGCAKLITSSSVLDDVACTTELTNGYVCGKIAT 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,538,248
Number of Sequences: 27780
Number of extensions: 261924
Number of successful extensions: 682
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)