Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1110
         (633 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.2  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    24   1.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    24   1.2  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   6.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.6  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
 Frame = +1

Query: 247 DYGTNDKVVHNLKLYLSNIFSMKDLGH-VTNYL----GIHVEQDLQNGIIK--MSQNHYL 405
           D   N K  +N+KLY+  +F M +    +  YL    G+   +DL   I +  + QN  L
Sbjct: 339 DLFENKKRKNNIKLYVRRVFIMDNCEELIPEYLNFIKGVVDSEDLPLNISREMLQQNKIL 398

Query: 406 RQILK 420
           + I K
Sbjct: 399 KVIRK 403


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +2

Query: 53  DDNVSVVKLNKSIYGLKKSPKYWNL-KFDKVIAKKGFSRSENDFCLYCKVNCEYKIY 220
           D  + V  +   +  L K P ++ L K  K++      R ++ +CL+   NC +  Y
Sbjct: 72  DATLYVQNIYTVLTALTKKPLWFKLLKNLKMVQNHNNIREKSHYCLFVASNCFFWSY 128


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +2

Query: 53  DDNVSVVKLNKSIYGLKKSPKYWNL-KFDKVIAKKGFSRSENDFCLYCKVNCEYKIY 220
           D  + V  +   +  L K P ++ L K  K++      R ++ +CL+   NC +  Y
Sbjct: 72  DATLYVQNIYTVLTALTKKPLWFKLLKNLKMVQNHNNIREKSHYCLFVASNCFFWSY 128


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 567 PDLCPSVAYLIMGLN 611
           PDLC  + Y  +GL+
Sbjct: 49  PDLCTHINYAFVGLD 63


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 383 LIIPFCKSC 357
           L++P CKSC
Sbjct: 208 LVMPLCKSC 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,242
Number of Sequences: 336
Number of extensions: 3052
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)