Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1110
         (633 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    70   7e-14
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    28   0.28 
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   1.5  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   3.5  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         23   6.1  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   6.1  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   6.1  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     23   6.1  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 69.7 bits (163), Expect = 7e-14
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
 Frame = +2

Query: 2   LYGDIQEDVYMRLPPGCD--DNVSVVKLNKSIYGLKKSPKYWNLKFDKVIAKKGFSRSEN 175
           LYGD+ E +YM+ P G +      V  L KS+YGLK++ + WN    +V+   GF  SE 
Sbjct: 546 LYGDLAETIYMKQPTGFEIGSKNDVCLLKKSLYGLKQAGRVWNQTITEVLRSLGFHSSEA 605

Query: 176 DFCLYCKVNCEYKIYLLLFVDDILI 250
           D CL+ K   +   ++LL+VDD+L+
Sbjct: 606 DPCLFVKNKRDRWSFILLYVDDMLV 630



 Score = 51.6 bits (118), Expect = 2e-08
 Identities = 26/83 (31%), Positives = 43/83 (51%)
 Frame = +1

Query: 256 TNDKVVHNLKLYLSNIFSMKDLGHVTNYLGIHVEQDLQNGIIKMSQNHYLRQILKKFNMC 435
           + D+   +++  L   F +  LG V NYLGI +E+  QNG   + Q  Y+R+I K+F   
Sbjct: 633 SEDREYEDIENTLKRHFKITTLGDVRNYLGIRIERG-QNGEYLLDQASYIRRIAKRFGQE 691

Query: 436 ESKPMSTPMEFKFQMFQSNNSDP 504
           +++P   PM+  +   Q     P
Sbjct: 692 DARPSRIPMDPGYPKIQQKEEKP 714



 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +3

Query: 522 RQILGSLMYAVLCTRPDLCPSVAYLIMGLNILN 620
           + ++G+L+Y  + TRPD+  S +  I+G  + N
Sbjct: 722 QSLVGALLYVAVNTRPDIAISAS--ILGRKVSN 752


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 27.9 bits (59), Expect = 0.28
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +3

Query: 528 ILGSLMYAVLCTRPDLCPSVAYLIMGL 608
           ILG++   V+ +RP +  S+ YL++GL
Sbjct: 98  ILGNIFSMVILSRPQMRSSINYLLIGL 124


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 364 LQNGIIKMSQNHYLRQILKKFNMCESKPMSTPME 465
           +QNG  K   N Y+ ++L + N  E +  + P E
Sbjct: 869 VQNGSAKQFANDYINEVLHEDNEDEERQAAGPSE 902


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 218 KFYIHNLLYNKDKNHFQI 165
           KFY++   Y KD  HF +
Sbjct: 759 KFYVYYDFYGKDNPHFHV 776


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 409 VLSNGFVTF**YHFANLAQHEYLNS*LHDLGLS*RKYY 296
           V +N   T+   ++ N    EYLN    D+GL+   YY
Sbjct: 200 VYANYTATYPMDYYNNFYTEEYLNYNTEDIGLNAYYYY 237


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 409 VLSNGFVTF**YHFANLAQHEYLNS*LHDLGLS*RKYY 296
           V +N   T+   ++ N    EYLN    D+GL+   YY
Sbjct: 200 VYANYTATYPMDYYNNFYTEEYLNYNTEDIGLNAYYYY 237


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 409 VLSNGFVTF**YHFANLAQHEYLNS*LHDLGLS*RKYY 296
           V +N   T+   ++ N    EYLN    D+GL+   YY
Sbjct: 200 VYANYTATYPMDYYNNFYTEEYLNYNTEDIGLNAYYYY 237


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 409 VLSNGFVTF**YHFANLAQHEYLNS*LHDLGLS*RKYY 296
           V +N   T+   ++ N    EYLN    D+GL+   YY
Sbjct: 200 VYANYTATYPMDYYNNFYTEEYLNYYTEDIGLNAYYYY 237


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,510
Number of Sequences: 2352
Number of extensions: 11315
Number of successful extensions: 30
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)