Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1097
         (584 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_7961| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.30 
SB_40462| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.9  

>SB_7961| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1957

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = -1

Query: 212 E*YKVISFIY*IHNSDKTFIIPKRLVLFKVFCIIMQEI*ILLYLKNRYIVHVLLNFH 42
           E +K+ S  + +H + K   +P R+    +FC + +    L +LK+R IVH  LN H
Sbjct: 162 ECFKIGSLHFVLHETSKEISLPDRVA---IFCDVSEG---LEFLKSRRIVHCFLNSH 212


>SB_40462| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1580

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 102 FLHYNTKHFKQNKTLWDYECFIRVMNLIN 188
           FL  N+K   Q+ +L D+ C   V+N+IN
Sbjct: 609 FLDLNSKRKPQHLSLGDHSCLHAVLNIIN 637


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,129,452
Number of Sequences: 59808
Number of extensions: 240873
Number of successful extensions: 347
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1410146228
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)