Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1086
         (344 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   0.60 
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    22   5.6  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            22   7.4  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    22   7.4  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 36  SCTRPSGRWCEXPSAGLCL 92
           SC RP G  C  P  G C+
Sbjct: 594 SCDRPGGLLCSGPDHGRCV 612


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 277 C*EKNR*HDLRDPNGLRRRVSRFECETR 194
           C  +N     + PN  +RR + F C+ R
Sbjct: 374 CRRRNTLGGAQTPNAAQRRSTGFRCQQR 401


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +3

Query: 150 EPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSCYRFFS 272
           + R   GSK     S  + S+ E  RR+P    RS   F S
Sbjct: 106 DARPRFGSKAAAANSSATSSESEDERRTPPQDMRSMAGFRS 146



 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 205 IQNARRDVEAHLDRGDRAIGFF 270
           +Q     +EAHL +G  AIG +
Sbjct: 191 LQGISAPIEAHLRKGRGAIGAY 212


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 88  HNPADGXSHHRPLGRVHEPNVRNCGS 11
           H+P +G  ++ P G  + P   N G+
Sbjct: 373 HSPVNGYGNNHPTGGSNLPGNNNGGA 398


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 360,856
Number of Sequences: 2352
Number of extensions: 6171
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24505155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)