Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1086
         (344 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical pr...    27   2.7  
Z68219-3|CAA92480.2|  747|Caenorhabditis elegans Hypothetical pr...    27   2.7  
AF040661-12|AAG24221.1|  210|Caenorhabditis elegans Hypothetical...    27   3.6  
Z93376-2|CAD59146.2|  578|Caenorhabditis elegans Hypothetical pr...    27   4.8  
Z82279-4|CAD59150.2|  578|Caenorhabditis elegans Hypothetical pr...    27   4.8  
AL132949-42|CAD59173.2|  578|Caenorhabditis elegans Hypothetical...    27   4.8  
Z36282-2|CAA85288.3|  240|Caenorhabditis elegans Hypothetical pr...    26   6.3  
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p...    26   6.3  
AF040661-10|AAG24215.1|  426|Caenorhabditis elegans Hypothetical...    26   6.3  
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr...    26   8.3  
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr...    26   8.3  
U22832-2|AAA64509.2|  571|Caenorhabditis elegans Hypothetical pr...    26   8.3  
AL132847-1|CAB63371.1|  375|Caenorhabditis elegans Hypothetical ...    26   8.3  

>Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical
           protein T27D12.3 protein.
          Length = 146

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 45  RPSGRWCEXPSAGLCLNASKAEAS 116
           RPSG WC     GL L  ++ EAS
Sbjct: 35  RPSGPWCVKLFVGLYLQGNRNEAS 58


>Z68219-3|CAA92480.2|  747|Caenorhabditis elegans Hypothetical
           protein T05A1.3 protein.
          Length = 747

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 235 HLDRGDRAIGFFLNTCITAPKVRI 306
           HLD  D  IGF  NT I+  K+++
Sbjct: 169 HLDVSDNDIGFLTNTLISLTKLKV 192


>AF040661-12|AAG24221.1|  210|Caenorhabditis elegans Hypothetical
           protein W10G11.14 protein.
          Length = 210

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +3

Query: 12  EPQFRTFGSCTRPSGRWCEXPSAGLCLNASKAEA 113
           EP ++ F    RPSG WC    AG   NA KA+A
Sbjct: 41  EPGWKFFN---RPSGGWCMRVFAG--FNAKKADA 69


>Z93376-2|CAD59146.2|  578|Caenorhabditis elegans Hypothetical
           protein E01F3.1b protein.
          Length = 578

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +1

Query: 94  TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 243
           T L   PA PN AR  S W  E+  + NN     + +  +I  +R++   H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171


>Z82279-4|CAD59150.2|  578|Caenorhabditis elegans Hypothetical
           protein E01F3.1b protein.
          Length = 578

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +1

Query: 94  TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 243
           T L   PA PN AR  S W  E+  + NN     + +  +I  +R++   H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171


>AL132949-42|CAD59173.2|  578|Caenorhabditis elegans Hypothetical
           protein E01F3.1b protein.
          Length = 578

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +1

Query: 94  TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 243
           T L   PA PN AR  S W  E+  + NN     + +  +I  +R++   H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171


>Z36282-2|CAA85288.3|  240|Caenorhabditis elegans Hypothetical
           protein K10G9.2 protein.
          Length = 240

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
 Frame = -2

Query: 160 SRGSTVSISLPDSA-----RLASALEAFRHNPADGXSH 62
           ++G ++S+SLP SA     R  +  +AFR++ A   SH
Sbjct: 135 NKGQSLSVSLPPSARHTPHRFVNEEDAFRNSMASSDSH 172


>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
           protein F47C12.1 protein.
          Length = 1827

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +3

Query: 87  CLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSC 257
           CL+A+  +   A S  D LTV P  S  S   + T   S   R  +  SP  + R C
Sbjct: 748 CLSAT-CQGIEASSKSDGLTVTPNNSTISFGQNVTISCSFPNRPGKLSSPLSNYRQC 803


>AF040661-10|AAG24215.1|  426|Caenorhabditis elegans Hypothetical
           protein W10G11.6 protein.
          Length = 426

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +3

Query: 6   REEPQFRTFGSCTRPSGRWCEXPSAGLCLNASKAEASLA 122
           R EP +R F    RPSG WC     G   +A+KA+A  A
Sbjct: 255 RCEPGWRFFN---RPSGGWCIRVFTG--FHAAKADAEAA 288


>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 17/71 (23%), Positives = 29/71 (40%)
 Frame = -2

Query: 238  NGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPADGXSHH 59
            N  R++      + R +       PD  G  + ++  D   LA+  E  +   A+   H 
Sbjct: 1171 NKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDLNESDQQTLATLTEQIKVTQAEIELHR 1230

Query: 58   RPLGRVHEPNV 26
            R L + HE N+
Sbjct: 1231 RDL-KKHESNL 1240


>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
            T12D8.1 protein.
          Length = 2561

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 17/71 (23%), Positives = 29/71 (40%)
 Frame = -2

Query: 238  NGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPADGXSHH 59
            N  R++      + R +       PD  G  + ++  D   LA+  E  +   A+   H 
Sbjct: 1171 NKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDLNESDQQTLATLTEQIKVTQAEIELHR 1230

Query: 58   RPLGRVHEPNV 26
            R L + HE N+
Sbjct: 1231 RDL-KKHESNL 1240


>U22832-2|AAA64509.2|  571|Caenorhabditis elegans Hypothetical
           protein C09F5.1 protein.
          Length = 571

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -1

Query: 338 TIPSPDIELSYIRTFGAVMHVLRKKPIARSPRSKW 234
           T+P+P   +SY + F +    L +K   R+ +S W
Sbjct: 186 TVPAPAAHVSYRQEFASDNESLARKDSYRAMQSSW 220


>AL132847-1|CAB63371.1|  375|Caenorhabditis elegans Hypothetical
           protein Y48G10A.2 protein.
          Length = 375

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +3

Query: 132 KDMLTVEPRESGGSKQCDFTSRVSHSKRETR 224
           K ++  EP+E+   +  D+ + ++HSK E +
Sbjct: 326 KMLIRTEPKETALRRAADYLNELTHSKTEKK 356


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,999,252
Number of Sequences: 27780
Number of extensions: 151154
Number of successful extensions: 443
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)