Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf1078
(719 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 57 1e-08
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 57 1e-08
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 53 2e-07
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 52 3e-07
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 50 2e-06
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 50 2e-06
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 50 2e-06
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 50 2e-06
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 50 2e-06
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 50 2e-06
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 50 2e-06
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 50 2e-06
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 46 4e-05
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 46 4e-05
AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical... 29 2.5
AL032626-26|CAA21533.2| 143|Caenorhabditis elegans Hypothetical... 29 2.5
Z81532-2|CAB04324.1| 290|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical pr... 28 5.8
U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical ... 28 5.8
Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical p... 28 7.7
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 514 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKR-G 690
IK ++NPDS+S AVL NA YFK W +KF + T R+F+ S++ + ++ R
Sbjct: 150 IKKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREFFSSENSKRETEFLHSRNS 209
Query: 691 DYKYGES 711
+ KY E+
Sbjct: 210 NRKYSEN 216
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 514 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKR-G 690
IK ++NPDS+S AVL NA YFK W +KF + T R+F+ S++ + ++ R
Sbjct: 150 IKKIINPDSISEELVAVLTNAFYFKANWQTKFKKESTYKREFFSSENSKRETEFLHSRNS 209
Query: 691 DYKYGES 711
+ KY E+
Sbjct: 210 NRKYSEN 216
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/63 (38%), Positives = 43/63 (68%)
Frame = +1
Query: 511 RIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG 690
+IKDL+ DS ++A A LVNA+YFK W SKF + T+ R+F+ S+ ++ ++P + +
Sbjct: 136 KIKDLIPADSANNAFA-FLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFLTELD 194
Query: 691 DYK 699
+++
Sbjct: 195 EHR 197
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/62 (29%), Positives = 39/62 (62%)
Frame = +2
Query: 335 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNTA 514
GVE K+ N+V+V+ + +++ ++ + +++DFS+ AAK++N +VE +TN
Sbjct: 77 GVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGK 136
Query: 515 LR 520
++
Sbjct: 137 IK 138
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/56 (42%), Positives = 39/56 (69%)
Frame = +1
Query: 511 RIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 678
+IKDL+ DS ++A A LVNA+YFK W SKF + T+ R+F+ S+ ++ ++P +
Sbjct: 136 KIKDLIPADSANNAFA-FLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFL 190
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/62 (29%), Positives = 39/62 (62%)
Frame = +2
Query: 335 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNTA 514
GVE K+ N+V+V+ + +++ ++ + +++DFS+ AAK++N +VE +TN
Sbjct: 77 GVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGK 136
Query: 515 LR 520
++
Sbjct: 137 IK 138
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/66 (36%), Positives = 40/66 (60%)
Frame = +1
Query: 511 RIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG 690
+I D++ PD+L A +L+NAI+F+G W KF E ++ +F +S + VPM+ +
Sbjct: 146 KIPDMIKPDNLKDVDA-ILINAIFFQGDWRRKFGE--PAESNFSISATENRLVPMLRETR 202
Query: 691 DYKYGE 708
DY Y +
Sbjct: 203 DYFYNK 208
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +2
Query: 326 SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 505
S+ VE +AN+++V + + F R+ +N++ IDF K+ AAK +N ++ E+T
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/66 (36%), Positives = 40/66 (60%)
Frame = +1
Query: 511 RIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRG 690
+I D++ PD+L A +L+NAI+F+G W KF E ++ +F +S + VPM+ +
Sbjct: 146 KIPDMIKPDNLKDVDA-ILINAIFFQGDWRRKFGE--PAESNFSISATENRLVPMLRETR 202
Query: 691 DYKYGE 708
DY Y +
Sbjct: 203 DYFYNK 208
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/60 (31%), Positives = 35/60 (58%)
Frame = +2
Query: 326 SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 505
S+ VE +AN+++V + + F R+ +N++ IDF K+ AAK +N ++ E+T
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +2
Query: 278 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 454
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 455 KNTVAAKSINDWVEENTNTALR 520
A++IN++V ENT ++
Sbjct: 121 NKEATAEAINNFVRENTGDHIK 142
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +1
Query: 514 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 681
IK ++ DS++S AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +2
Query: 278 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 454
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 455 KNTVAAKSINDWVEENTNTALR 520
A++IN++V ENT ++
Sbjct: 121 NKEATAEAINNFVRENTGDHIK 142
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +1
Query: 514 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 681
IK ++ DS++S AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +2
Query: 278 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 454
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 455 KNTVAAKSINDWVEENTNTALR 520
A++IN++V ENT ++
Sbjct: 121 NKEATAEAINNFVRENTGDHIK 142
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +1
Query: 514 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 681
IK ++ DS++S AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +2
Query: 278 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 454
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 455 KNTVAAKSINDWVEENTNTALR 520
A++IN++V ENT ++
Sbjct: 121 NKEATAEAINNFVRENTGDHIK 142
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +1
Query: 514 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 681
IK ++ DS++S AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +2
Query: 278 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 454
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 455 KNTVAAKSINDWVEENTNTALR 520
A++IN++V ENT ++
Sbjct: 121 NKEATAEAINNFVRENTGDHIK 142
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +1
Query: 514 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 681
IK ++ DS++S AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +2
Query: 278 DDAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 454
D+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 61 DEQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFD 120
Query: 455 KNTVAAKSINDWVEENTNTALR 520
A++IN++V ENT ++
Sbjct: 121 NKEATAEAINNFVRENTGDHIK 142
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +1
Query: 514 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 681
IK ++ DS++S AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 141 IKKIIGSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 511 RIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 678
+IK++ DS+ A A +L+N+IYFK W KFD S++DF + + K+ M
Sbjct: 138 KIKNIATQDSIKDAIA-LLINSIYFKADWDDKFDGMSVSEQDFTLHTGEKKKIKFM 192
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +2
Query: 278 DDAIRTEFASKSRDLRS-IKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 454
D+ + F+ S+++++ KGVE+ +ANKVY+ G ++ F + + +D +++D +
Sbjct: 60 DEQLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT 119
Query: 455 KNTVAAKSINDWVEENTNTALR 520
A + IN +V TN ++
Sbjct: 120 -TPAAVQEINSFVNTATNGKIK 140
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 511 RIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 678
+IK++ DS+ A A +L+N+IYFK W KFD S++DF + + K+ M
Sbjct: 138 KIKNIATQDSIKDAIA-LLINSIYFKADWDDKFDGMSVSEQDFTLHTGEKKKIKFM 192
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +2
Query: 278 DDAIRTEFASKSRDLRS-IKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS 454
D+ + F+ S+++++ KGVE+ +ANKVY+ G ++ F + + +D +++D +
Sbjct: 60 DEQLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT 119
Query: 455 KNTVAAKSINDWVEENTNTALR 520
A + IN +V TN ++
Sbjct: 120 -TPAAVQEINSFVNTATNGKIK 140
>AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical
protein Y53F4B.24 protein.
Length = 866
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 598 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESA 714
S +FD+ L +D Y +KD+ ++ R D++Y A
Sbjct: 648 SGQFDQTLYNDLTLYTAKDEETDETLVSNRSDFEYTNDA 686
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 598 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESA 714
S +FD+ L +D Y +KD+ ++ R D++Y A
Sbjct: 140 SGQFDQILYNDLTLYTAKDEETDETLVSNRSDFEYTNDA 178
>AL032626-26|CAA21533.2| 143|Caenorhabditis elegans Hypothetical
protein Y37D8A.15 protein.
Length = 143
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 421 LQFGRPKH*FLEEYSRS*VY*RLGRRKYQY 510
L+FG+ KH +L R Y R G+RK++Y
Sbjct: 108 LRFGKRKHEYLRFGKRKHEYLRFGKRKHEY 137
>Z81532-2|CAB04324.1| 290|Caenorhabditis elegans Hypothetical
protein F36F2.2 protein.
Length = 290
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 255 KALHGFHHQKLKLTEREEAAPKMPRGQRFSL 163
K L H ++ T EE+ P P+GQRF L
Sbjct: 163 KGLEEVHEIEVDKTVIEESIPNQPKGQRFDL 193
>Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical
protein F20D1.7 protein.
Length = 695
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 57 IAIAAMAAVTNLSNVLKN-GNDNFTARMFTEVV-KNNPGKSVVLSAFSVLPPLAQLALAS 230
+A+ ++ + N+L+N G D+ R V+ +NN KS+ + F +P L L L+
Sbjct: 124 MALTSLLELDLSDNMLENLGADSIHIRSIQRVILRNNQIKSIGVHVFRYMPTLKMLDLSG 183
Query: 231 DGET 242
+ T
Sbjct: 184 NNMT 187
>Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical
protein T12G3.4 protein.
Length = 447
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 101 HIREICDGCHCRDGDSKQTNDCLHVCGLRLSNV 3
H ++ G H DG K+ N C GLRLS+V
Sbjct: 147 HAVQLAQGNHDCDGSYKKMNLCGRPLGLRLSDV 179
>U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical
protein C09B9.3 protein.
Length = 884
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Frame = -2
Query: 499 FFYPIVNRLSCDCILREINVLDVRIEDVPGNDCKILV*FSTIMNVYFIRHFKLNA----- 335
+++PIV C++ + V + + + +D V F N+Y + +
Sbjct: 268 YYFPIVTVFQFICLMGWLKVAEALLNPLGEDDDDFEVNFLIDSNIYMTMSYNCDVATDSY 327
Query: 334 FN*SKITAFTREFCSYSIVVREADSFQSSSWVS 236
FN K+ FT+ +I+ + ++ S W S
Sbjct: 328 FNFFKVNPFTKSTYKNNIIFQILFRWKGSVWKS 360
>AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical
protein Y54G9A.4 protein.
Length = 319
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 705 SIFIIAAFIHHGYFDCFVFAHVEVTVTGQSL 613
SI +AFI H +F+CF F E V+ S+
Sbjct: 172 SIIFTSAFILHVFFECFAFGIQEDAVSVTSI 202
>Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical
protein F54B8.16 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 148 TSVNILAVKLSFPFLSTLERFVTAAIAAMAIVNKQMIVFMFV 23
TSV + +K +F F+ TLERF++ N++ I F ++
Sbjct: 87 TSVTMGIIKGTFAFMITLERFISVFFPIHYRNNRRKIPFYWI 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,644,679
Number of Sequences: 27780
Number of extensions: 313703
Number of successful extensions: 982
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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