Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf1078
(719 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 59 3e-09
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 59 3e-09
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 56 2e-08
At2g14540.1 68415.m01628 serpin family protein / serine protease... 54 1e-07
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 54 1e-07
At1g64030.1 68414.m07252 serpin family protein / serine protease... 53 2e-07
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 51 7e-07
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 50 2e-06
At1g62170.1 68414.m07013 serpin family protein / serine protease... 49 4e-06
At2g35580.1 68415.m04357 serpin family protein / serine protease... 46 3e-05
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 1.3
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 2.3
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 29 3.1
At3g01420.1 68416.m00065 pathogen-responsive alpha-dioxygenase, ... 29 4.1
At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containi... 29 4.1
At1g80480.1 68414.m09427 PRLI-interacting factor L, putative sim... 28 7.2
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 27 9.5
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
Frame = +1
Query: 514 IKDLVNPDSLSSATAAVLV--NAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM--Y 681
IK++++ DS+ + ++L+ NA+YFKGAWS KFD +LT DF++ +KVP M Y
Sbjct: 150 IKEILSDDSIKTIRESMLILANAVYFKGAWSKKFDAKLTKSYDFHLLDGTMVKVPFMTNY 209
Query: 682 KRGDYKY 702
K+ +Y
Sbjct: 210 KKQYLEY 216
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Frame = +1
Query: 514 IKDLVNPDSLSS--ATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 678
IK +++ DS+ + ++ VL NA+YFKGAWSSKFD +T DF++ ++KVP M
Sbjct: 85 IKQILSRDSIDTIRSSTLVLANAVYFKGAWSSKFDANMTKKNDFHLLDGTSVKVPFM 141
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +1
Query: 562 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGD 693
+L NA+YFK AWS KFD +LT D DF++ T+KVP M D
Sbjct: 168 ILANAVYFKAAWSRKFDAKLTKDNDFHLLDGNTVKVPFMMSYKD 211
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/55 (40%), Positives = 36/55 (65%)
Frame = +1
Query: 514 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 678
IK+++ S++S T + NA+YFKGAW FD+ +T D+ F++ K++ VP M
Sbjct: 179 IKEILPRGSVTSLTNWIYGNALYFKGAWEKAFDKSMTRDKPFHLLNGKSVSVPFM 233
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/63 (39%), Positives = 40/63 (63%)
Frame = +1
Query: 514 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGD 693
IK+L+ P S+++ T + NA+YFKGAW +KF + +T + F++ K + VP M K +
Sbjct: 51 IKNLLPPGSVTNQTIKIYGNALYFKGAWENKFGKSMTIHKPFHLVNGKQVLVPFM-KSYE 109
Query: 694 YKY 702
KY
Sbjct: 110 RKY 112
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +1
Query: 514 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 678
IKDL+ S++S T + NA+ FKGAW F++ T D DFY+ ++ VP M
Sbjct: 151 IKDLLPDGSVTSLTNKIYANALSFKGAWKRPFEKYYTRDNDFYLVNGTSVSVPFM 205
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 317 DLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWV 493
D + G ++ AN +++ D F + + F + +DF S+ K +N WV
Sbjct: 84 DRSATGGPKITAANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWV 143
Query: 494 EENTNTALR 520
E +TN ++
Sbjct: 144 EHHTNNLIK 152
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/55 (45%), Positives = 34/55 (61%)
Frame = +1
Query: 514 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 678
I DL+ S+ S T V NA+YFKGAW +KFD+ T D +F+ K+ + VP M
Sbjct: 28 IIDLLPRGSVKSETVQVYGNALYFKGAWENKFDKSSTKDNEFHQGKE--VHVPFM 80
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +1
Query: 514 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 678
I +++ S S T + NA+YFKG W+ KFDE LT + +F++ + P M
Sbjct: 150 ITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQEGEFHLLDGNKVTAPFM 204
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +1
Query: 514 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 678
IKDL+ S++S T V +A+YFKG W K+ + +T + FY+ ++ VP M
Sbjct: 215 IKDLLPRGSVTSLTDRVYGSALYFKGTWEEKYSKSMTKCKPFYLLNGTSVSVPFM 269
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 529 NPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 678
NP S + T + NA++F G W S+FD LT D DF++ ++VP M
Sbjct: 157 NPKS-APLTDHIFANALFFNGRWDSQFDPSLTKDSDFHLLDGTKVRVPFM 205
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 185 REDNAFPWIIFHYFGKHSGCEVIVSIFEHIREICDG 78
R D +++F KHS CE+ VS E ++ G
Sbjct: 2 RSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASG 37
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 209 ERRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEHI 96
E ++RKC +N+ W++ F K SG E + + I
Sbjct: 153 ESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEI 190
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 144 EVVKN--NPGKSVVLSAFSVLPPLAQLALASDGETHEEL 254
E VKN +PGK VL +++L P AQL + + E E L
Sbjct: 636 EQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERL 674
>At3g01420.1 68416.m00065 pathogen-responsive alpha-dioxygenase,
putative similar to pathogen-inducible alpha-dioxygenase
[Nicotiana attenuata] GI:12539609; contains Pfam profile
PF03098: Animal haem peroxidase
Length = 639
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 389 DENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNTALRI*LIRTRSAQPQRLFS 568
DE V DV++ DV+ +D +A K I + T + + ++ TR + R F+
Sbjct: 516 DEEAIEVLDDVYDGDVEELDLLVGLMAEKKIKGFAISETAFYIFL-IMATRRLEADRFFT 574
Query: 569 S 571
S
Sbjct: 575 S 575
>At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 613
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 182 EDNAFPWIIFHYFGKHSGCEVIVSIFEHIRE 90
+D F ++ +GKH CE + IFE +RE
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLRE 464
>At1g80480.1 68414.m09427 PRLI-interacting factor L, putative
similar to PRLI-interacting factor L [Arabidopsis
thaliana] GI:11139268; contains Pfam profile PF02492:
Cobalamin synthesis protein/P47K
Length = 444
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 5 HSRDAGHKHEDNHLFVYYRHRGNGSRHKS 91
H D H H+ NH ++ H G+ H S
Sbjct: 312 HDHDHDHHHDHNHDHDHHHHDGHDHHHHS 340
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373:
jmjC domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 27.5 bits (58), Expect = 9.5
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = -3
Query: 546 AERVRIN*ILNAVLVFSSTQ---SLIDLAAT--VFFEKSMFWTSELKTSLETTAK 397
AE V++ + VL+ S++Q SLIDLA +E S+ WTSEL +L K
Sbjct: 677 AEEVKVPFSYDDVLLESASQEELSLIDLAIEDEEKYEHSVDWTSELGINLRYCVK 731
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,831,302
Number of Sequences: 28952
Number of extensions: 295164
Number of successful extensions: 957
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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