Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1076
         (614 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL161656-6|CAI12120.1|  695|Homo sapiens vacuolar protein sortin...    59   1e-08
AL161656-5|CAC21465.1|  839|Homo sapiens vacuolar protein sortin...    59   1e-08
AK055787-1|BAB71013.1|  695|Homo sapiens protein ( Homo sapiens ...    59   1e-08
AF308801-1|AAG34678.1|  839|Homo sapiens vacuolar protein sortin...    59   1e-08
AL834401-1|CAD39063.1|  694|Homo sapiens hypothetical protein pr...    46   1e-04
AL161656-8|CAI12122.1|  274|Homo sapiens vacuolar protein sortin...    46   1e-04
AL161656-7|CAI12121.1|  227|Homo sapiens vacuolar protein sortin...    46   1e-04
AK127641-1|BAC87068.1|  529|Homo sapiens protein ( Homo sapiens ...    33   1.1  
AK090901-1|BAC03542.1|  250|Homo sapiens protein ( Homo sapiens ...    31   4.3  

>AL161656-6|CAI12120.1|  695|Homo sapiens vacuolar protein sorting
           16 (yeast) protein.
          Length = 695

 Score = 58.8 bits (136), Expect = 1e-08
 Identities = 25/72 (34%), Positives = 42/72 (58%)
 Frame = -3

Query: 507 YDMFGAYQKTFNMGQEVRDTKVCKAQLFPNPHGIGLAVITTTNRMFLVSNVSEPKARPVP 328
           Y + G +++ F+MG EV   +V  A++F    G G+A++T  +R  L +NV + K R +P
Sbjct: 109 YGLHGDFRRHFSMGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMP 168

Query: 327 DIPRANEPISCW 292
           ++P      SCW
Sbjct: 169 EVPGLQSAPSCW 180



 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = -2

Query: 205 PEIKNPYTQILSIVASQNGKHIAFFTDSGFLWIGSSDLRNNYCELDTDYIKQPKEFM*C 29
           P +    +  L +  S   +H+A FTD+G++W+G++ L+   CE + +    PK+ + C
Sbjct: 213 PGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCEFNCNIRAPPKQMVWC 271



 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 17/36 (47%), Positives = 26/36 (72%)
 Frame = -1

Query: 614 GNVISKILWNSGVLLHIGWSDGEQLLCIQESGDVLI 507
           G  ++ +LW SG ++ +GWS  E+LLC+QE G VL+
Sbjct: 73  GMPLASLLWKSGPVVSLGWSAEEELLCVQEDGAVLV 108


>AL161656-5|CAC21465.1|  839|Homo sapiens vacuolar protein sorting
           16 (yeast) protein.
          Length = 839

 Score = 58.8 bits (136), Expect = 1e-08
 Identities = 25/72 (34%), Positives = 42/72 (58%)
 Frame = -3

Query: 507 YDMFGAYQKTFNMGQEVRDTKVCKAQLFPNPHGIGLAVITTTNRMFLVSNVSEPKARPVP 328
           Y + G +++ F+MG EV   +V  A++F    G G+A++T  +R  L +NV + K R +P
Sbjct: 109 YGLHGDFRRHFSMGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMP 168

Query: 327 DIPRANEPISCW 292
           ++P      SCW
Sbjct: 169 EVPGLQSAPSCW 180



 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = -2

Query: 205 PEIKNPYTQILSIVASQNGKHIAFFTDSGFLWIGSSDLRNNYCELDTDYIKQPKEFM*C 29
           P +    +  L +  S   +H+A FTD+G++W+G++ L+   CE + +    PK+ + C
Sbjct: 213 PGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCEFNCNIRAPPKQMVWC 271



 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 17/36 (47%), Positives = 26/36 (72%)
 Frame = -1

Query: 614 GNVISKILWNSGVLLHIGWSDGEQLLCIQESGDVLI 507
           G  ++ +LW SG ++ +GWS  E+LLC+QE G VL+
Sbjct: 73  GMPLASLLWKSGPVVSLGWSAEEELLCVQEDGAVLV 108


>AK055787-1|BAB71013.1|  695|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31225 fis, clone KIDNE2004344, weakly similar to
           Vacuolar protein sorting-associated protein. ).
          Length = 695

 Score = 58.8 bits (136), Expect = 1e-08
 Identities = 25/72 (34%), Positives = 42/72 (58%)
 Frame = -3

Query: 507 YDMFGAYQKTFNMGQEVRDTKVCKAQLFPNPHGIGLAVITTTNRMFLVSNVSEPKARPVP 328
           Y + G +++ F+MG EV   +V  A++F    G G+A++T  +R  L +NV + K R +P
Sbjct: 109 YGLHGDFRRHFSMGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMP 168

Query: 327 DIPRANEPISCW 292
           ++P      SCW
Sbjct: 169 EVPGLQSAPSCW 180



 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = -2

Query: 205 PEIKNPYTQILSIVASQNGKHIAFFTDSGFLWIGSSDLRNNYCELDTDYIKQPKEFM*C 29
           P +    +  L +  S   +H+A FTD+G++W+G++ L+   CE + +    PK+ + C
Sbjct: 213 PGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCEFNCNIRAPPKQMVWC 271



 Score = 44.4 bits (100), Expect = 3e-04
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = -1

Query: 614 GNVISKILWNSGVLLHIGWSDGEQLLCIQESGDVLI 507
           G  ++ +LW SG +  +GWS  E+LLC+QE G VL+
Sbjct: 73  GMPLASLLWKSGPVASLGWSAEEELLCVQEDGAVLV 108


>AF308801-1|AAG34678.1|  839|Homo sapiens vacuolar protein sorting
           protein 16 protein.
          Length = 839

 Score = 58.8 bits (136), Expect = 1e-08
 Identities = 25/72 (34%), Positives = 42/72 (58%)
 Frame = -3

Query: 507 YDMFGAYQKTFNMGQEVRDTKVCKAQLFPNPHGIGLAVITTTNRMFLVSNVSEPKARPVP 328
           Y + G +++ F+MG EV   +V  A++F    G G+A++T  +R  L +NV + K R +P
Sbjct: 109 YGLHGDFRRHFSMGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMP 168

Query: 327 DIPRANEPISCW 292
           ++P      SCW
Sbjct: 169 EVPGLQSAPSCW 180



 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = -2

Query: 205 PEIKNPYTQILSIVASQNGKHIAFFTDSGFLWIGSSDLRNNYCELDTDYIKQPKEFM*C 29
           P +    +  L +  S   +H+A FTD+G++W+G++ L+   CE + +    PK+ + C
Sbjct: 213 PGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCEFNCNIRAPPKQMVWC 271



 Score = 45.2 bits (102), Expect = 2e-04
 Identities = 17/36 (47%), Positives = 26/36 (72%)
 Frame = -1

Query: 614 GNVISKILWNSGVLLHIGWSDGEQLLCIQESGDVLI 507
           G  ++ +LW SG ++ +GWS  E+LLC+QE G VL+
Sbjct: 73  GMPLASLLWKSGPVVSLGWSAEEELLCVQEDGAVLV 108


>AL834401-1|CAD39063.1|  694|Homo sapiens hypothetical protein
           protein.
          Length = 694

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = -2

Query: 205 PEIKNPYTQILSIVASQNGKHIAFFTDSGFLWIGSSDLRNNYCELDTDYIKQPKEFM*C 29
           P +    +  L +  S   +H+A FTD+G++W+G++ L+   CE + +    PK+ + C
Sbjct: 68  PGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCEFNCNIRAPPKQMVWC 126



 Score = 31.5 bits (68), Expect = 2.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 396 VITTTNRMFLVSNVSEPKARPVPDIPRANEPISCW 292
           ++T  +R  L +NV + K R +P++P      SCW
Sbjct: 1   ILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW 35


>AL161656-8|CAI12122.1|  274|Homo sapiens vacuolar protein sorting
           16 (yeast) protein.
          Length = 274

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = -2

Query: 205 PEIKNPYTQILSIVASQNGKHIAFFTDSGFLWIGSSDLRNNYCELDTDYIKQPKEFM*C 29
           P +    +  L +  S   +H+A FTD+G++W+G++ L+   CE + +    PK+ + C
Sbjct: 95  PGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCEFNCNIRAPPKQMVWC 153



 Score = 45.6 bits (103), Expect = 1e-04
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = -3

Query: 462 EVRDTKVCKAQLFPNPHGIGLAVITTTNRMFLVSNVSEPKARPVPDIPRANEPISCW 292
           EV   +V  A++F    G G+A++T  +R  L +NV + K R +P++P      SCW
Sbjct: 6   EVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW 62


>AL161656-7|CAI12121.1|  227|Homo sapiens vacuolar protein sorting
           16 (yeast) protein.
          Length = 227

 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 17/59 (28%), Positives = 33/59 (55%)
 Frame = -2

Query: 205 PEIKNPYTQILSIVASQNGKHIAFFTDSGFLWIGSSDLRNNYCELDTDYIKQPKEFM*C 29
           P +    +  L +  S   +H+A FTD+G++W+G++ L+   CE + +    PK+ + C
Sbjct: 95  PGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCEFNCNIRAPPKQMVWC 153



 Score = 45.6 bits (103), Expect = 1e-04
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = -3

Query: 462 EVRDTKVCKAQLFPNPHGIGLAVITTTNRMFLVSNVSEPKARPVPDIPRANEPISCW 292
           EV   +V  A++F    G G+A++T  +R  L +NV + K R +P++P      SCW
Sbjct: 6   EVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW 62


>AK127641-1|BAC87068.1|  529|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45739 fis, clone KIDNE2010049, weakly  similar
           to Glycerol kinase 2 (EC 2.7.1.30). ).
          Length = 529

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = -1

Query: 566 IGWSDGEQLLCIQESGDVLIMTCLELTRKLSIWAKKSEIQKFVK 435
           IGW  G++++C+ ES    I T ++  ++L ++   +E +K  K
Sbjct: 320 IGWKIGQEVVCLAESNAGDIGTAIKWAQQLDLFTDAAETEKMAK 363


>AK090901-1|BAC03542.1|  250|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33582 fis, clone BRAMY2011849, weakly similar to
           GLYCEROL KINASE 2 (EC 2.7.1.30). ).
          Length = 250

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = -1

Query: 566 IGWSDGEQLLCIQESGDVLIMTCLELTRKLSIWAKKSEIQKFVK 435
           IGW  G++++C+ ES      T ++  ++L ++   +E +K  K
Sbjct: 41  IGWKIGQEVVCLAESNAGDTGTAIKWAQQLDLFTDAAETEKMAK 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,622,085
Number of Sequences: 237096
Number of extensions: 2063999
Number of successful extensions: 7795
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7795
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)