Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf1075
(495 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006117-1|AAH06117.1| 441|Homo sapiens L2HGDH protein protein. 119 6e-27
AY757363-1|AAV52330.1| 463|Homo sapiens putative L-2-hydroxyglu... 119 6e-27
AK022680-1|BAB14174.1| 463|Homo sapiens protein ( Homo sapiens ... 119 6e-27
AL358234-2|CAH70767.1| 495|Homo sapiens WW domain containing ad... 32 1.3
AL161936-3|CAI40923.1| 495|Homo sapiens WW domain containing ad... 32 1.3
AL161936-1|CAI40921.1| 389|Homo sapiens WW domain containing ad... 32 1.3
AB028945-1|BAA82974.1| 1131|Homo sapiens KIAA1022 protein protein. 30 5.1
X63131-1|CAA44841.1| 633|Homo sapiens My1 (PML) protein. 29 8.9
S50913-1|AAB19601.2| 641|Homo sapiens PML protein. 29 8.9
M73779-1|AAA60126.1| 797|Homo sapiens PML-RAR protein protein. 29 8.9
M73778-1|AAA60125.1| 560|Homo sapiens PML-1 protein protein. 29 8.9
BT009911-1|AAP88913.1| 781|Homo sapiens promyelocytic leukemia ... 29 8.9
BC020994-1|AAH20994.1| 781|Homo sapiens promyelocytic leukemia ... 29 8.9
BC000080-1|AAH00080.2| 781|Homo sapiens promyelocytic leukemia ... 29 8.9
AJ007608-1|CAC22255.1| 963|Homo sapiens protocadherin alpha-C1 ... 29 8.9
AF230411-1|AAG50190.1| 585|Homo sapiens tripartite motif protei... 29 8.9
AF230410-1|AAG50189.1| 829|Homo sapiens tripartite motif protei... 29 8.9
AF230409-1|AAG50188.1| 423|Homo sapiens tripartite motif protei... 29 8.9
AF230408-1|AAG50187.1| 435|Homo sapiens tripartite motif protei... 29 8.9
AF230407-1|AAG50186.1| 423|Homo sapiens tripartite motif protei... 29 8.9
AF230406-1|AAG50185.1| 633|Homo sapiens tripartite motif protei... 29 8.9
AF230405-1|AAG50184.1| 560|Homo sapiens tripartite motif protei... 29 8.9
AF230404-1|AAG50183.1| 854|Homo sapiens tripartite motif protei... 29 8.9
AF230403-1|AAG50182.1| 824|Homo sapiens tripartite motif protei... 29 8.9
AF230402-1|AAG50181.1| 611|Homo sapiens tripartite motif protei... 29 8.9
AF230401-1|AAG50180.1| 882|Homo sapiens tripartite motif protei... 29 8.9
AF152473-1|AAD43734.1| 818|Homo sapiens protocadherin alpha C1 ... 29 8.9
AF152303-1|AAD43697.1| 963|Homo sapiens protocadherin alpha C1 ... 29 8.9
AB209411-1|BAD92648.1| 862|Homo sapiens promyelocytic leukemia ... 29 8.9
AB208950-1|BAD92187.1| 571|Homo sapiens promyelocytic leukemia ... 29 8.9
>BC006117-1|AAH06117.1| 441|Homo sapiens L2HGDH protein protein.
Length = 441
Score = 119 bits (286), Expect = 6e-27
Identities = 54/81 (66%), Positives = 64/81 (79%)
Frame = +3
Query: 249 KRNRFAFHQSGNNSGVIHAGIYYKPGSLKAKLCVKGLNLSYKYFDQKGIKYSKCGKLIVA 428
K A HQ+G+NSGVIH+GIYYKP SLKAKLCV+G L Y+Y QKGI Y +CGKLIVA
Sbjct: 81 KEKDLAVHQTGHNSGVIHSGIYYKPESLKAKLCVQGAALLYEYCQQKGISYKQCGKLIVA 140
Query: 429 TERSEVPRLFDLYERGLKNGV 491
E+ E+PRL LYE+GL+NGV
Sbjct: 141 VEQEEIPRLQALYEKGLQNGV 161
Score = 33.5 bits (73), Expect = 0.41
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 136 AGDTSQFDXXXXXXXXXXXXXXRELILKHPHLKVALVEKETDL 264
+ TS FD R LIL+HP L + ++EKE DL
Sbjct: 43 SASTSSFDIVIVGGGIVGLASARALILRHPSLSIGVLEKEKDL 85
>AY757363-1|AAV52330.1| 463|Homo sapiens putative
L-2-hydroxyglutarate dehydrogenase protein.
Length = 463
Score = 119 bits (286), Expect = 6e-27
Identities = 54/81 (66%), Positives = 64/81 (79%)
Frame = +3
Query: 249 KRNRFAFHQSGNNSGVIHAGIYYKPGSLKAKLCVKGLNLSYKYFDQKGIKYSKCGKLIVA 428
K A HQ+G+NSGVIH+GIYYKP SLKAKLCV+G L Y+Y QKGI Y +CGKLIVA
Sbjct: 81 KEKDLAVHQTGHNSGVIHSGIYYKPESLKAKLCVQGAALLYEYCQQKGISYKQCGKLIVA 140
Query: 429 TERSEVPRLFDLYERGLKNGV 491
E+ E+PRL LYE+GL+NGV
Sbjct: 141 VEQEEIPRLQALYEKGLQNGV 161
Score = 33.5 bits (73), Expect = 0.41
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 136 AGDTSQFDXXXXXXXXXXXXXXRELILKHPHLKVALVEKETDL 264
+ TS FD R LIL+HP L + ++EKE DL
Sbjct: 43 SASTSSFDIVIVGGGIVGLASARALILRHPSLSIGVLEKEKDL 85
>AK022680-1|BAB14174.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ12618 fis, clone NT2RM4001666, weakly similar to
HYPOTHETICAL 48.6 KD PROTEIN IN ALPA-GABP INTERGENIC
REGION. ).
Length = 463
Score = 119 bits (286), Expect = 6e-27
Identities = 54/81 (66%), Positives = 64/81 (79%)
Frame = +3
Query: 249 KRNRFAFHQSGNNSGVIHAGIYYKPGSLKAKLCVKGLNLSYKYFDQKGIKYSKCGKLIVA 428
K A HQ+G+NSGVIH+GIYYKP SLKAKLCV+G L Y+Y QKGI Y +CGKLIVA
Sbjct: 81 KEKDLAVHQTGHNSGVIHSGIYYKPESLKAKLCVQGAALLYEYCQQKGISYKQCGKLIVA 140
Query: 429 TERSEVPRLFDLYERGLKNGV 491
E+ E+PRL LYE+GL+NGV
Sbjct: 141 VEQEEIPRLQALYEKGLQNGV 161
Score = 33.5 bits (73), Expect = 0.41
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 136 AGDTSQFDXXXXXXXXXXXXXXRELILKHPHLKVALVEKETDL 264
+ TS FD R LIL+HP L + ++EKE DL
Sbjct: 43 SASTSSFDIVIVGGGIVGLASARALILRHPSLSIGVLEKEKDL 85
>AL358234-2|CAH70767.1| 495|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 495
Score = 31.9 bits (69), Expect = 1.3
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -2
Query: 293 ATVISTLVEGKSVSFSTKATFKCGCFNINSLAEAEPTMPPPITATSNCEVSPAP 132
AT S GKS S + C + +S + PT PP T+ S VSP P
Sbjct: 149 ATATSGFASGKSTSGDKPVSHSCTTPSTSSASGLNPTSAPP-TSASAVPVSPVP 201
>AL161936-3|CAI40923.1| 495|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 495
Score = 31.9 bits (69), Expect = 1.3
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -2
Query: 293 ATVISTLVEGKSVSFSTKATFKCGCFNINSLAEAEPTMPPPITATSNCEVSPAP 132
AT S GKS S + C + +S + PT PP T+ S VSP P
Sbjct: 149 ATATSGFASGKSTSGDKPVSHSCTTPSTSSASGLNPTSAPP-TSASAVPVSPVP 201
>AL161936-1|CAI40921.1| 389|Homo sapiens WW domain containing
adaptor with coiled-coil protein.
Length = 389
Score = 31.9 bits (69), Expect = 1.3
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = -2
Query: 293 ATVISTLVEGKSVSFSTKATFKCGCFNINSLAEAEPTMPPPITATSNCEVSPAP 132
AT S GKS S + C + +S + PT PP T+ S VSP P
Sbjct: 39 ATATSGFASGKSTSGDKPVSHSCTTPSTSSASGLNPTSAPP-TSASAVPVSPVP 91
>AB028945-1|BAA82974.1| 1131|Homo sapiens KIAA1022 protein protein.
Length = 1131
Score = 29.9 bits (64), Expect = 5.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 188 PTMPPPITATSNCEVSPAPALY 123
P+ PPP T NC SP P +Y
Sbjct: 178 PSPPPPSPTTYNCPKSPTPRVY 199
>X63131-1|CAA44841.1| 633|Homo sapiens My1 (PML) protein.
Length = 633
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>S50913-1|AAB19601.2| 641|Homo sapiens PML protein.
Length = 641
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>M73779-1|AAA60126.1| 797|Homo sapiens PML-RAR protein protein.
Length = 797
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>M73778-1|AAA60125.1| 560|Homo sapiens PML-1 protein protein.
Length = 560
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>BT009911-1|AAP88913.1| 781|Homo sapiens promyelocytic leukemia
protein.
Length = 781
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>BC020994-1|AAH20994.1| 781|Homo sapiens promyelocytic leukemia
protein.
Length = 781
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>BC000080-1|AAH00080.2| 781|Homo sapiens promyelocytic leukemia
protein.
Length = 781
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>AJ007608-1|CAC22255.1| 963|Homo sapiens protocadherin alpha-C1
protein.
Length = 963
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -2
Query: 329 GTRFIINTCMNHATVISTLVEGKSVSFSTKATFKCGCFNINSLAEAE 189
G++ + N CM AT+ T VE S ++ +A+ G N + L E
Sbjct: 728 GSKMVSNPCMTSATIDVTTVERLSQTYLYRASLGLGSDNNSLLLRGE 774
>AF230411-1|AAG50190.1| 585|Homo sapiens tripartite motif protein
TRIM19 lambda protein.
Length = 585
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>AF230410-1|AAG50189.1| 829|Homo sapiens tripartite motif protein
TRIM19 kappa protein.
Length = 829
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>AF230409-1|AAG50188.1| 423|Homo sapiens tripartite motif protein
TRIM19 iota protein.
Length = 423
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>AF230408-1|AAG50187.1| 435|Homo sapiens tripartite motif protein
TRIM19 theta protein.
Length = 435
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>AF230407-1|AAG50186.1| 423|Homo sapiens tripartite motif protein
TRIM19 eta protein.
Length = 423
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>AF230406-1|AAG50185.1| 633|Homo sapiens tripartite motif protein
TRIM19 zeta protein.
Length = 633
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>AF230405-1|AAG50184.1| 560|Homo sapiens tripartite motif protein
TRIM19 epsilon protein.
Length = 560
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>AF230404-1|AAG50183.1| 854|Homo sapiens tripartite motif protein
TRIM19 delta protein.
Length = 854
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>AF230403-1|AAG50182.1| 824|Homo sapiens tripartite motif protein
TRIM19 gamma protein.
Length = 824
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>AF230402-1|AAG50181.1| 611|Homo sapiens tripartite motif protein
TRIM19 beta protein.
Length = 611
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>AF230401-1|AAG50180.1| 882|Homo sapiens tripartite motif protein
TRIM19 alpha protein.
Length = 882
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 20 EPTMPPPETPSEGRQPSPSPS 40
>AF152473-1|AAD43734.1| 818|Homo sapiens protocadherin alpha C1
short form protein protein.
Length = 818
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -2
Query: 329 GTRFIINTCMNHATVISTLVEGKSVSFSTKATFKCGCFNINSLAEAE 189
G++ + N CM AT+ T VE S ++ +A+ G N + L E
Sbjct: 728 GSKMVSNPCMTSATIDVTTVERLSQTYLYRASLGLGSDNNSLLLRGE 774
>AF152303-1|AAD43697.1| 963|Homo sapiens protocadherin alpha C1
protein.
Length = 963
Score = 29.1 bits (62), Expect = 8.9
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -2
Query: 329 GTRFIINTCMNHATVISTLVEGKSVSFSTKATFKCGCFNINSLAEAE 189
G++ + N CM AT+ T VE S ++ +A+ G N + L E
Sbjct: 728 GSKMVSNPCMTSATIDVTTVERLSQTYLYRASLGLGSDNNSLLLRGE 774
>AB209411-1|BAD92648.1| 862|Homo sapiens promyelocytic leukemia
protein isoform 1 variant protein.
Length = 862
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 48 EPTMPPPETPSEGRQPSPSPS 68
>AB208950-1|BAD92187.1| 571|Homo sapiens promyelocytic leukemia
protein isoform 11 variant protein.
Length = 571
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 191 EPTMPPPITATSNCEVSPAPA 129
EPTMPPP T + + SP+P+
Sbjct: 23 EPTMPPPETPSEGRQPSPSPS 43
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,537,367
Number of Sequences: 237096
Number of extensions: 1258352
Number of successful extensions: 3127
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3127
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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