Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1075
         (495 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060420-1|AAL25459.1|  243|Drosophila melanogaster LD39082p pro...   112   2e-25
AE014134-3004|AAF53729.1|  455|Drosophila melanogaster CG10639-P...   112   2e-25
AE014134-1000|AAF52312.1|  659|Drosophila melanogaster CG13992-P...    29   3.5  
AE014134-985|AAF52302.4| 3489|Drosophila melanogaster CG14001-PA...    29   4.6  
BT001685-1|AAN71440.1| 1017|Drosophila melanogaster RE58116p pro...    28   8.0  
AE013599-3996|AAF47302.1| 1047|Drosophila melanogaster CG12851-P...    28   8.0  

>AY060420-1|AAL25459.1|  243|Drosophila melanogaster LD39082p
           protein.
          Length = 243

 Score =  112 bits (270), Expect = 2e-25
 Identities = 53/93 (56%), Positives = 68/93 (73%)
 Frame = +3

Query: 213 IKTPTFKGCFS*KRNRFAFHQSGNNSGVIHAGIYYKPGSLKAKLCVKGLNLSYKYFDQKG 392
           ++ P+ K     K  + A HQSG+NSGVIHAGIYYKPG+LKA+LCV+G++L+Y Y D+K 
Sbjct: 63  LRHPSLKVAVLEKECKLAKHQSGHNSGVIHAGIYYKPGTLKARLCVEGMHLAYAYLDEKK 122

Query: 393 IKYSKCGKLIVATERSEVPRLFDLYERGLKNGV 491
           I Y K GKLIVAT+  EV  L DL +RG+ N V
Sbjct: 123 IPYKKTGKLIVATDEKEVKLLKDLEKRGIANNV 155



 Score = 37.5 bits (83), Expect = 0.010
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 67  RFLLNFNYRHP-VTTGTLRRYSAGAGDTSQFDXXXXXXXXXXXXXXRELILKHPHLKVAL 243
           R LLN     P  +T T +R    +     +D              RE++L+HP LKVA+
Sbjct: 13  RSLLNVGVAAPNESTATHKRSQHSSSSCGDYDLVVVGGGIVGAASAREIVLRHPSLKVAV 72

Query: 244 VEKETDL 264
           +EKE  L
Sbjct: 73  LEKECKL 79


>AE014134-3004|AAF53729.1|  455|Drosophila melanogaster CG10639-PA
           protein.
          Length = 455

 Score =  112 bits (270), Expect = 2e-25
 Identities = 53/93 (56%), Positives = 68/93 (73%)
 Frame = +3

Query: 213 IKTPTFKGCFS*KRNRFAFHQSGNNSGVIHAGIYYKPGSLKAKLCVKGLNLSYKYFDQKG 392
           ++ P+ K     K  + A HQSG+NSGVIHAGIYYKPG+LKA+LCV+G++L+Y Y D+K 
Sbjct: 63  LRHPSLKVAVLEKECKLAKHQSGHNSGVIHAGIYYKPGTLKARLCVEGMHLAYAYLDEKK 122

Query: 393 IKYSKCGKLIVATERSEVPRLFDLYERGLKNGV 491
           I Y K GKLIVAT+  EV  L DL +RG+ N V
Sbjct: 123 IPYKKTGKLIVATDEKEVKLLKDLEKRGIANNV 155



 Score = 37.5 bits (83), Expect = 0.010
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 67  RFLLNFNYRHP-VTTGTLRRYSAGAGDTSQFDXXXXXXXXXXXXXXRELILKHPHLKVAL 243
           R LLN     P  +T T +R    +     +D              RE++L+HP LKVA+
Sbjct: 13  RSLLNVGVAAPNESTATHKRSQHSSSSCGDYDLVVVGGGIVGAASAREIVLRHPSLKVAV 72

Query: 244 VEKETDL 264
           +EKE  L
Sbjct: 73  LEKECKL 79


>AE014134-1000|AAF52312.1|  659|Drosophila melanogaster CG13992-PA
           protein.
          Length = 659

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 200 AEAEPTMPPPITATSNCEVSPAPALYLRNVP 108
           A A PT+PPP    S  +V+P+   Y    P
Sbjct: 362 APAPPTLPPPPPTYSQADVTPSANTYCNGCP 392


>AE014134-985|AAF52302.4| 3489|Drosophila melanogaster CG14001-PA
            protein.
          Length = 3489

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +3

Query: 171  WRRHSRLCFSQGV 209
            WRR+SRLC+ QGV
Sbjct: 1229 WRRYSRLCWKQGV 1241


>BT001685-1|AAN71440.1| 1017|Drosophila melanogaster RE58116p
           protein.
          Length = 1017

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 179 PPPITATSNCEVSPAPALYLRNVPVVTG 96
           P P  ATSNC  +P+ A    ++ +V G
Sbjct: 454 PVPYAATSNCRATPSQAAKQADIDIVGG 481


>AE013599-3996|AAF47302.1| 1047|Drosophila melanogaster CG12851-PA
           protein.
          Length = 1047

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 179 PPPITATSNCEVSPAPALYLRNVPVVTG 96
           P P  ATSNC  +P+ A    ++ +V G
Sbjct: 454 PVPYAATSNCRATPSQAAKQADIDIVGG 481


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,425,977
Number of Sequences: 53049
Number of extensions: 399661
Number of successful extensions: 1140
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)