Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1075
         (495 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   1.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.4  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   7.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.5  

>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +1

Query: 70  FLLNF-NYRHPVTTGTLRRY 126
           +LLN  NY HP T   L+RY
Sbjct: 31  YLLNCKNYDHPTTLLKLKRY 50


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 444 LLISLLPQ*VYHIWN 400
           LLIS LP  +Y+IW+
Sbjct: 102 LLISGLPPEIYYIWS 116


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 370 INILIRKESSIPNVVNLLWQQRDQKFLDFLIYMKGDL 480
           IN++ R    IP+  N ++ +    + DF    +G+L
Sbjct: 5   INVIFRHGDRIPDEKNEMYPKDPYLYYDFYPLERGEL 41


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 370 INILIRKESSIPNVVNLLWQQRDQKFLDFLIYMKGDL 480
           IN++ R    IP+  N ++ +    + DF    +G+L
Sbjct: 20  INVIFRHGDRIPDEKNEMYPKDPYLYYDFYPLERGEL 56


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 370 INILIRKESSIPNVVNLLWQQ 432
           I+ LI     +PN ++L WQQ
Sbjct: 84  ISDLILLVLGLPNELSLFWQQ 104


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 144 YFTI*CSSDWRRHSRLCFSQ 203
           Y+   CS DW R S  C S+
Sbjct: 16  YYHQRCSRDWFRISAGCVSR 35


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,544
Number of Sequences: 438
Number of extensions: 2822
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)