Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1074
         (667 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    46   4e-07
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    42   3e-06
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   3.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.0  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.9  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 45.6 bits (103), Expect = 4e-07
 Identities = 25/85 (29%), Positives = 42/85 (49%)
 Frame = +2

Query: 218 LPKNLEFSIFYEK*GKKPSRCSSCLYYAKDFECFYKTACYARVYMNQGMFLYAYYIAIIQ 397
           L ++  FS+F  K  +   R        ++ +     A YAR  +N  +F YA  +AI+ 
Sbjct: 74  LERDANFSLFIPKHRRIAGRLIDIFLGMRNVDDLLSVAVYARDRVNPYLFSYALSVAILH 133

Query: 398 RSDTASFVLPAPYEAYPQYFVNMEV 472
           R DT    LP+  E++P  +V+ +V
Sbjct: 134 RQDTQDIDLPSFIESFPDKYVDSKV 158



 Score = 24.2 bits (50), Expect = 0.97
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 610 EDRIAYVTEDVGLNAYDYY 666
           E R+AY  ED+G+N + ++
Sbjct: 191 EHRLAYFREDLGINLHHWH 209


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 42.3 bits (95), Expect = 3e-06
 Identities = 22/85 (25%), Positives = 41/85 (48%)
 Frame = +2

Query: 218 LPKNLEFSIFYEK*GKKPSRCSSCLYYAKDFECFYKTACYARVYMNQGMFLYAYYIAIIQ 397
           L ++  FS+F  K  K   +       A+  +     A + R  +N  +F YA+ +A++ 
Sbjct: 74  LGRHENFSLFIPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVNPYLFYYAFSVALLH 133

Query: 398 RSDTASFVLPAPYEAYPQYFVNMEV 472
           R DT +  LP+    +P  +V+ +V
Sbjct: 134 RPDTQNLDLPSFIHVFPDKYVDSQV 158



 Score = 25.8 bits (54), Expect = 0.32
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 604 NNEDRIAYVTEDVGLNAYDYY 666
           + E R+AY  ED+GLN + ++
Sbjct: 189 DEEHRVAYWREDIGLNLHHWH 209


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 204 TRSDSFPRIWNSRSFTKNEG 263
           T  D+FPR + +R F  N G
Sbjct: 311 TIKDNFPRFYAARFFVINRG 330


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 204 TRSDSFPRIWNSRSFTKNEG 263
           T  D+FPR + +R F  N G
Sbjct: 311 TIKDNFPRFYAARFFVINRG 330


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +1

Query: 550 ENEQFVMDANYSNSLTYPNNEDRIAYVTEDVGLNAYDYY 666
           EN  +  D NY +   +PN  + I      V   + D Y
Sbjct: 439 ENNHYNGDPNYISPEVFPNTNNAIMTPPASVQTESSDNY 477


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +1

Query: 550 ENEQFVMDANYSNSLTYPNNEDRIAYVTEDVGLNAYDYY 666
           EN  +  D NY +   +PN  + I      V   + D Y
Sbjct: 387 ENNHYNGDPNYISPEVFPNTNNAIMTPPASVQTESSDNY 425


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 502 HHLNVVHFIFNFHV 461
           HH++  H + N HV
Sbjct: 328 HHIHAQHHVVNHHV 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,753
Number of Sequences: 336
Number of extensions: 3178
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)