BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbVf1074 (667 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_03_0513 - 16681227-16683936,16685572-16685966 29 2.5 11_04_0051 + 12863978-12864476,12864575-12864674,12865567-128656... 29 4.4 09_03_0156 - 12844549-12845138,12845237-12845723 29 4.4 05_04_0191 + 18927302-18927707,18928747-18928979,18929062-189291... 29 4.4 05_07_0364 - 29611149-29611211,29611441-29611623,29611796-296118... 28 7.7 >04_03_0513 - 16681227-16683936,16685572-16685966 Length = 1034 Score = 29.5 bits (63), Expect = 2.5 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = +1 Query: 151 QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 249 Q G+LH+ ESL +D+ G IP QE LD L Sbjct: 905 QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936 >11_04_0051 + 12863978-12864476,12864575-12864674,12865567-12865657, 12866114-12866176,12866364-12866549,12866994-12867024, 12867054-12867502 Length = 472 Score = 28.7 bits (61), Expect = 4.4 Identities = 14/50 (28%), Positives = 23/50 (46%) Frame = +1 Query: 517 EKICYNYGIIKENEQFVMDANYSNSLTYPNNEDRIAYVTEDVGLNAYDYY 666 E+ + + + N +F+ N LTY E+ A +TE+ L Y Y Sbjct: 66 EEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGY 115 >09_03_0156 - 12844549-12845138,12845237-12845723 Length = 358 Score = 28.7 bits (61), Expect = 4.4 Identities = 14/50 (28%), Positives = 23/50 (46%) Frame = +1 Query: 517 EKICYNYGIIKENEQFVMDANYSNSLTYPNNEDRIAYVTEDVGLNAYDYY 666 E+ + + + N +F+ N LTY E+ A +TE+ L Y Y Sbjct: 62 EEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGY 111 >05_04_0191 + 18927302-18927707,18928747-18928979,18929062-18929127, 18929262-18929340,18929935-18930014,18930099-18930122, 18930254-18930375,18930902-18931109,18931960-18932006, 18932914-18932998,18933292-18933355,18933488-18933609 Length = 511 Score = 28.7 bits (61), Expect = 4.4 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%) Frame = +1 Query: 502 GWCL---DEKICYNYGIIKENEQFVM 570 G CL DE +C+ YG ++ENE +++ Sbjct: 452 GVCLAFADEVLCWLYGTVRENEDYIL 477 >05_07_0364 - 29611149-29611211,29611441-29611623,29611796-29611853, 29612150-29612207,29612504-29612561,29612859-29612916, 29613214-29613271,29613568-29613625,29613923-29613980, 29614277-29614334,29614631-29614688,29614983-29615040, 29615337-29615394,29615691-29615748,29616045-29616102, 29616400-29616457,29616755-29616812,29617109-29617166, 29617463-29617520,29617817-29617874,29618171-29618228, 29618525-29618582,29618878-29618935,29619233-29619290, 29619942-29619999,29620297-29620376,29620649-29620706, 29621001-29621058,29621353-29621410,29621707-29621764, 29622415-29622472,29622767-29622824,29623121-29623164, 29623475-29623532,29623829-29623886,29624537-29624594, 29624889-29624946,29625243-29625300,29625597-29625654, 29626305-29626400,29626697-29626792,29627797-29627892, 29628188-29628283,29629996-29630053,29630350-29630407, 29630704-29630799,29631096-29631191,29632196-29632253, 29632549-29632644,29633648-29633743,29634040-29634042 Length = 1114 Score = 27.9 bits (59), Expect = 7.7 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 Query: 204 TRSDSFPRIWNSRSFTKNEGRSHRAVQAVSIMPKILNVSTKQ 329 T + S+P +W R T + ++R A + P+I NVS KQ Sbjct: 58 TTATSWPMLWTLRYSTLRQ--NNRCFVAYVVDPEIFNVSPKQ 97 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,828,862 Number of Sequences: 37544 Number of extensions: 314205 Number of successful extensions: 766 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 751 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 766 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1679486824 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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