Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1074
         (667 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0513 - 16681227-16683936,16685572-16685966                       29   2.5  
11_04_0051 + 12863978-12864476,12864575-12864674,12865567-128656...    29   4.4  
09_03_0156 - 12844549-12845138,12845237-12845723                       29   4.4  
05_04_0191 + 18927302-18927707,18928747-18928979,18929062-189291...    29   4.4  
05_07_0364 - 29611149-29611211,29611441-29611623,29611796-296118...    28   7.7  

>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +1

Query: 151  QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 249
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


>11_04_0051 +
           12863978-12864476,12864575-12864674,12865567-12865657,
           12866114-12866176,12866364-12866549,12866994-12867024,
           12867054-12867502
          Length = 472

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +1

Query: 517 EKICYNYGIIKENEQFVMDANYSNSLTYPNNEDRIAYVTEDVGLNAYDYY 666
           E+    + + + N +F+   N    LTY   E+  A +TE+  L  Y  Y
Sbjct: 66  EEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGY 115


>09_03_0156 - 12844549-12845138,12845237-12845723
          Length = 358

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +1

Query: 517 EKICYNYGIIKENEQFVMDANYSNSLTYPNNEDRIAYVTEDVGLNAYDYY 666
           E+    + + + N +F+   N    LTY   E+  A +TE+  L  Y  Y
Sbjct: 62  EEALQRFDVYRRNAEFIDAVNLRGDLTYQLAENEFADLTEEEFLATYTGY 111


>05_04_0191 +
           18927302-18927707,18928747-18928979,18929062-18929127,
           18929262-18929340,18929935-18930014,18930099-18930122,
           18930254-18930375,18930902-18931109,18931960-18932006,
           18932914-18932998,18933292-18933355,18933488-18933609
          Length = 511

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
 Frame = +1

Query: 502 GWCL---DEKICYNYGIIKENEQFVM 570
           G CL   DE +C+ YG ++ENE +++
Sbjct: 452 GVCLAFADEVLCWLYGTVRENEDYIL 477


>05_07_0364 -
           29611149-29611211,29611441-29611623,29611796-29611853,
           29612150-29612207,29612504-29612561,29612859-29612916,
           29613214-29613271,29613568-29613625,29613923-29613980,
           29614277-29614334,29614631-29614688,29614983-29615040,
           29615337-29615394,29615691-29615748,29616045-29616102,
           29616400-29616457,29616755-29616812,29617109-29617166,
           29617463-29617520,29617817-29617874,29618171-29618228,
           29618525-29618582,29618878-29618935,29619233-29619290,
           29619942-29619999,29620297-29620376,29620649-29620706,
           29621001-29621058,29621353-29621410,29621707-29621764,
           29622415-29622472,29622767-29622824,29623121-29623164,
           29623475-29623532,29623829-29623886,29624537-29624594,
           29624889-29624946,29625243-29625300,29625597-29625654,
           29626305-29626400,29626697-29626792,29627797-29627892,
           29628188-29628283,29629996-29630053,29630350-29630407,
           29630704-29630799,29631096-29631191,29632196-29632253,
           29632549-29632644,29633648-29633743,29634040-29634042
          Length = 1114

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 204 TRSDSFPRIWNSRSFTKNEGRSHRAVQAVSIMPKILNVSTKQ 329
           T + S+P +W  R  T  +  ++R   A  + P+I NVS KQ
Sbjct: 58  TTATSWPMLWTLRYSTLRQ--NNRCFVAYVVDPEIFNVSPKQ 97


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,828,862
Number of Sequences: 37544
Number of extensions: 314205
Number of successful extensions: 766
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)