Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1073
         (375 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093825-1|AAH93825.1| 1037|Homo sapiens caspase recruitment dom...    29   3.7  
AF356193-1|AAK32718.1| 1037|Homo sapiens caspase recruitment dom...    29   3.7  
D43945-1|BAA21908.1|  347|Homo sapiens TFEC isoform (or TFECL) p...    29   6.5  
AC096551-1|AAS02009.1|  258|Homo sapiens unknown protein.              29   6.5  

>BC093825-1|AAH93825.1| 1037|Homo sapiens caspase recruitment domain
            family, member 6 protein.
          Length = 1037

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 69   EP*IMHQQRGDPEGSQEAYCQEQKIRKEPSPC 164
            +P   H     P+ SQ   CQ Q  + +PSPC
Sbjct: 956  QPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPC 987


>AF356193-1|AAK32718.1| 1037|Homo sapiens caspase recruitment domain
            protein 6 protein.
          Length = 1037

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 69   EP*IMHQQRGDPEGSQEAYCQEQKIRKEPSPC 164
            +P   H     P+ SQ   CQ Q  + +PSPC
Sbjct: 956  QPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPC 987


>D43945-1|BAA21908.1|  347|Homo sapiens TFEC isoform (or TFECL)
           protein.
          Length = 347

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 87  QQRGDPEGSQEAYCQEQKIRKEPSPCLC 170
           +Q+  PE +   YCQ+  + + PSP LC
Sbjct: 249 KQQSHPEQNSVDYCQQLTVSQGPSPELC 276


>AC096551-1|AAS02009.1|  258|Homo sapiens unknown protein.
          Length = 258

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 87  QQRGDPEGSQEAYCQEQKIRKEPSPCLC 170
           +Q+  PE +   YCQ+  + + PSP LC
Sbjct: 160 KQQSHPEQNSVDYCQQLTVSQGPSPELC 187


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,550,968
Number of Sequences: 237096
Number of extensions: 1152295
Number of successful extensions: 2836
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2836
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)