BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbVf1073 (375 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC093825-1|AAH93825.1| 1037|Homo sapiens caspase recruitment dom... 29 3.7 AF356193-1|AAK32718.1| 1037|Homo sapiens caspase recruitment dom... 29 3.7 D43945-1|BAA21908.1| 347|Homo sapiens TFEC isoform (or TFECL) p... 29 6.5 AC096551-1|AAS02009.1| 258|Homo sapiens unknown protein. 29 6.5 >BC093825-1|AAH93825.1| 1037|Homo sapiens caspase recruitment domain family, member 6 protein. Length = 1037 Score = 29.5 bits (63), Expect = 3.7 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +3 Query: 69 EP*IMHQQRGDPEGSQEAYCQEQKIRKEPSPC 164 +P H P+ SQ CQ Q + +PSPC Sbjct: 956 QPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPC 987 >AF356193-1|AAK32718.1| 1037|Homo sapiens caspase recruitment domain protein 6 protein. Length = 1037 Score = 29.5 bits (63), Expect = 3.7 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +3 Query: 69 EP*IMHQQRGDPEGSQEAYCQEQKIRKEPSPC 164 +P H P+ SQ CQ Q + +PSPC Sbjct: 956 QPKPFHSVPSQPKSSQTKSCQSQPSQTKPSPC 987 >D43945-1|BAA21908.1| 347|Homo sapiens TFEC isoform (or TFECL) protein. Length = 347 Score = 28.7 bits (61), Expect = 6.5 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +3 Query: 87 QQRGDPEGSQEAYCQEQKIRKEPSPCLC 170 +Q+ PE + YCQ+ + + PSP LC Sbjct: 249 KQQSHPEQNSVDYCQQLTVSQGPSPELC 276 >AC096551-1|AAS02009.1| 258|Homo sapiens unknown protein. Length = 258 Score = 28.7 bits (61), Expect = 6.5 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +3 Query: 87 QQRGDPEGSQEAYCQEQKIRKEPSPCLC 170 +Q+ PE + YCQ+ + + PSP LC Sbjct: 160 KQQSHPEQNSVDYCQQLTVSQGPSPELC 187 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 53,550,968 Number of Sequences: 237096 Number of extensions: 1152295 Number of successful extensions: 2836 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2787 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2836 length of database: 76,859,062 effective HSP length: 81 effective length of database: 57,654,286 effective search space used: 2479134298 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -