Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1073
         (375 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66500-1|CAA91303.1|  325|Caenorhabditis elegans Hypothetical pr...    27   3.3  
Z19155-2|CAA79561.1| 1139|Caenorhabditis elegans Hypothetical pr...    27   3.3  
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z82090-6|CAB51468.1|  278|Caenorhabditis elegans Hypothetical pr...    27   5.8  
Z81526-10|CAB51464.1|  278|Caenorhabditis elegans Hypothetical p...    27   5.8  
AC084155-5|AAK84606.1|  433|Caenorhabditis elegans Hypothetical ...    27   5.8  
Z81513-6|CAB04176.1|  341|Caenorhabditis elegans Hypothetical pr...    26   7.6  
Z70757-8|CAA94804.1|  175|Caenorhabditis elegans Hypothetical pr...    26   7.6  
Z19595-1|CAA79650.1|  175|Caenorhabditis elegans her-1 protein p...    26   7.6  

>Z66500-1|CAA91303.1|  325|Caenorhabditis elegans Hypothetical
           protein T05C12.1 protein.
          Length = 325

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = +1

Query: 157 VLAFVVEWIDENKELEWE 210
           +LA+ V+++D+N E EW+
Sbjct: 304 ILAYCVKFVDDNAEFEWD 321


>Z19155-2|CAA79561.1| 1139|Caenorhabditis elegans Hypothetical
           protein F54G8.3 protein.
          Length = 1139

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -1

Query: 264 RVLYMPKRLMLPRGTEGGFPFQLFVFVYPFDNKGKDLAPFESFV 133
           R++ + K +  PRG +  FP  + ++V     +G +L  F S V
Sbjct: 510 RMVDIDKGVNCPRGAKTCFPLDMVIYVDEETKRGAELVDFSSDV 553


>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
            F47A4.2 protein.
          Length = 3498

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 81   MHQQRGDPEGSQEAYCQEQKIRKEPSP 161
            M+Q   +P+G  ++Y Q+Q +  +P P
Sbjct: 2949 MNQGSSNPQGGMQSYQQQQPVLGQPGP 2975


>Z82090-6|CAB51468.1|  278|Caenorhabditis elegans Hypothetical
           protein ZK337.5 protein.
          Length = 278

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = -2

Query: 356 NEFVIFKEDSVPMTEIMKMLDEGKVPFDMS 267
           NE  ++ ++ + +TE+++ ++  KVP D S
Sbjct: 231 NEHAMWADEGISLTEMLEEIEARKVPVDSS 260


>Z81526-10|CAB51464.1|  278|Caenorhabditis elegans Hypothetical
           protein ZK337.5 protein.
          Length = 278

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = -2

Query: 356 NEFVIFKEDSVPMTEIMKMLDEGKVPFDMS 267
           NE  ++ ++ + +TE+++ ++  KVP D S
Sbjct: 231 NEHAMWADEGISLTEMLEEIEARKVPVDSS 260


>AC084155-5|AAK84606.1|  433|Caenorhabditis elegans Hypothetical
           protein Y45G5AM.7 protein.
          Length = 433

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 21/74 (28%), Positives = 33/74 (44%)
 Frame = +1

Query: 49  ILEIHVRNLE*CINNGAIQREAKRLIVKNKRFERSQVLAFVVEWIDENKELEWESTFSTS 228
           I E H R L+   N   +Q E   L  KN++ E +     V +  ++   LE  +   T 
Sbjct: 140 IQEFHERELDLARNVEILQEENSNLTAKNEKLEET-----VDDLHEKVANLETSNKELTE 194

Query: 229 RQHESFRHVQNSSD 270
              ++ R + NSSD
Sbjct: 195 INVDNERKISNSSD 208


>Z81513-6|CAB04176.1|  341|Caenorhabditis elegans Hypothetical
           protein F26D2.7 protein.
          Length = 341

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1

Query: 115 KRLIVKNKRFERSQVLAFVVEWIDENKELEWES 213
           + +I KN  FE S V  F++   +EN  ++W++
Sbjct: 163 REVIRKNFDFEISSVARFIMMPYNENNTIQWKA 195


>Z70757-8|CAA94804.1|  175|Caenorhabditis elegans Hypothetical
           protein ZK287.8a protein.
          Length = 175

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 275 DMSEEFCTCLKDSCCLEVLK 216
           D +E+ CT  +  CC+E++K
Sbjct: 27  DAAEKCCTRNRQECCIEIMK 46


>Z19595-1|CAA79650.1|  175|Caenorhabditis elegans her-1 protein
           protein.
          Length = 175

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 275 DMSEEFCTCLKDSCCLEVLK 216
           D +E+ CT  +  CC+E++K
Sbjct: 27  DAAEKCCTRNRQECCIEIMK 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,644,889
Number of Sequences: 27780
Number of extensions: 180532
Number of successful extensions: 529
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)