Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVf1072
(717 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 5.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 5.0
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 6.7
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 6.7
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 6.7
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 6.7
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 6.7
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 6.7
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 6.7
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 6.7
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 8.8
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 600 EAKTHLAPPGKSLVHDI 550
+ K HL P G+ LVH +
Sbjct: 182 DGKFHLLPTGELLVHSL 198
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 600 EAKTHLAPPGKSLVHDI 550
+ K HL P G+ LVH +
Sbjct: 182 DGKFHLLPTGELLVHSL 198
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 504 SSEKNNKSHT*IQLSRCHEPKISPVVLNGFSLRKY 608
+S++ ++ T + RC EPKI + N + Y
Sbjct: 62 TSKERSRDRT--ERERCKEPKIISSLSNNYKYSNY 94
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 504 SSEKNNKSHT*IQLSRCHEPKISPVVLNGFSLRKY 608
+S++ ++ T + RC EPKI + N + Y
Sbjct: 62 TSKERSRDRT--ERERCKEPKIISSLSNNYKYSNY 94
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 504 SSEKNNKSHT*IQLSRCHEPKISPVVLNGFSLRKY 608
+S++ ++ T + RC EPKI + N + Y
Sbjct: 62 TSKERSRDRT--ERERCKEPKIISSLSNNYKYSNY 94
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 504 SSEKNNKSHT*IQLSRCHEPKISPVVLNGFSLRKY 608
+S++ ++ T + RC EPKI + N + Y
Sbjct: 62 TSKERSRDRT--ERERCKEPKIISSLSNNYKYSNY 94
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 504 SSEKNNKSHT*IQLSRCHEPKISPVVLNGFSLRKY 608
+S++ ++ T + RC EPKI + N + Y
Sbjct: 62 TSKERSRDRT--ERERCKEPKIISSLSNNYKYSNY 94
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 504 SSEKNNKSHT*IQLSRCHEPKISPVVLNGFSLRKY 608
+S++ ++ T + RC EPKI + N + Y
Sbjct: 62 TSKERSRDRT--ERERCKEPKIISSLSNNYKYSNY 94
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.7
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 504 SSEKNNKSHT*IQLSRCHEPKISPVVLNGFSLRKY 608
+S++ ++ T + RC EPKI + N + Y
Sbjct: 62 TSKERSRDRT--ERERCKEPKIISSLSNNYKYSNY 94
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 308 AESTTGSETRPTEKNRRKTQ 367
A TTG+ T PT + R++ Q
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQ 271
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 445 LCNINNDHDYCLFDYYN*YNLVRHSPL 365
+ N NND++Y YYN N + P+
Sbjct: 93 ISNYNNDNNYNKKLYYN-INYIEQIPV 118
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,852
Number of Sequences: 438
Number of extensions: 3117
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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