Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1072
         (717 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g29660.1 68414.m03625 GDSL-motif lipase/hydrolase family prot...    34   0.11 
At1g29670.1 68414.m03626 GDSL-motif lipase/hydrolase family prot...    33   0.25 
At5g45670.1 68418.m05615 GDSL-motif lipase/hydrolase family prot...    29   2.3  
At4g18970.1 68417.m02794 GDSL-motif lipase/hydrolase family prot...    29   2.3  

>At1g29660.1 68414.m03625 GDSL-motif lipase/hydrolase family protein
           low similarity to family II lipase EXL1 [Arabidopsis
           thaliana] GI:15054382; contains InterPro Entry IPR001087
           Lipolytic enzyme, G-D-S-L family
          Length = 364

 Score = 33.9 bits (74), Expect = 0.11
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = -3

Query: 187 KLFTNRIRSVI--LNEFFPQCLTTSVIAYGVFQIVIAGPSAF 68
           ++F NR+ S++  LN        T + AYG FQ +IA PSA+
Sbjct: 249 RIFNNRLISMVQQLNNAHSDASFTYINAYGAFQDIIANPSAY 290


>At1g29670.1 68414.m03626 GDSL-motif lipase/hydrolase family protein
           similar to family II lipase EXL1 GI:15054382 from
           [Arabidopsis thaliana]; contains Pfam profile: PF00657
           Lipase/Acylhydrolase with GDSL-like motif
          Length = 363

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = -3

Query: 187 KLFTNRIRSVI--LNEFFPQCLTTSVIAYGVFQIVIAGPSAF 68
           ++F N++RS++  LN   P      + AYG+FQ +I  P+ F
Sbjct: 248 QIFNNKLRSLVDQLNNNHPDAKFIYINAYGIFQDMITNPARF 289


>At5g45670.1 68418.m05615 GDSL-motif lipase/hydrolase family protein
           similar to family II lipases EXL3 GI:15054386, EXL1
           GI:15054382, EXL2 GI:15054384 from [Arabidopsis
           thaliana]; contains Pfam profile PF00657: GDSL-like
           Lipase/Acylhydrolase
          Length = 362

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = -3

Query: 187 KLFTNRIRSVI--LNEFFPQCLTTSVIAYGVFQIVIAGPSAF 68
           ++F +++ S++   N+  P    T + AYG+FQ +I  P+ +
Sbjct: 247 RIFNSKLISIVDAFNQNTPDAKFTYINAYGIFQDIITNPARY 288


>At4g18970.1 68417.m02794 GDSL-motif lipase/hydrolase family protein
           similar to family II lipases EXL3 GI:15054386, EXL1
           GI:15054382, EXL2 GI:15054384 from [Arabidopsis
           thaliana]; contains Pfam profile PF00657: GDSL-like
           Lipase/Acylhydrolase
          Length = 361

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -3

Query: 187 KLFTNRIRSVI--LNEFFPQCLTTSVIAYGVFQIVIAGPSAF 68
           ++F +++ S++   N+  P    T + AYG+FQ ++A PS +
Sbjct: 246 RIFNSKLVSLVDHFNQNTPGAKFTYINAYGIFQDMVANPSRY 287


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,959,354
Number of Sequences: 28952
Number of extensions: 206620
Number of successful extensions: 372
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)