Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1062
         (574 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024449-1|ABC86511.1| 1403|Drosophila melanogaster GH15984p pro...    28   7.8  
AY118968-1|AAM50828.1|  531|Drosophila melanogaster LD45876p pro...    28   7.8  
AL031884-3|CAA21413.1|  658|Drosophila melanogaster EG:23E12.2 p...    28   7.8  

>BT024449-1|ABC86511.1| 1403|Drosophila melanogaster GH15984p protein.
          Length = 1403

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
 Frame = +3

Query: 249  VINDPILLIKRKNYLRDNSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVRSLK--SY 422
            V+  P L+++  N   + ++ FF SS+ +++      + +K KC      ++ SL+  ++
Sbjct: 989  VLATPNLVLRLGNKANNKTITFFLSSDFERTQWIDSILSLKQKCNLPGANTINSLEVTAF 1048

Query: 423  MI*VQTGV-SQVGFYLL 470
            ++ +Q G+ +++G YL+
Sbjct: 1049 IVAMQKGMKTEMGSYLM 1065


>AY118968-1|AAM50828.1|  531|Drosophila melanogaster LD45876p
           protein.
          Length = 531

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
 Frame = +3

Query: 249 VINDPILLIKRKNYLRDNSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVRSLK--SY 422
           V+  P L+++  N   + ++ FF SS+ +++      + +K KC      ++ SL+  ++
Sbjct: 117 VLATPNLVLRLGNKANNKTITFFLSSDFERTQWIDSILSLKQKCNLPGANTINSLEVTAF 176

Query: 423 MI*VQTGV-SQVGFYLL 470
           ++ +Q G+ +++G YL+
Sbjct: 177 IVAMQKGMKTEMGSYLM 193


>AL031884-3|CAA21413.1|  658|Drosophila melanogaster EG:23E12.2
           protein.
          Length = 658

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
 Frame = +3

Query: 249 VINDPILLIKRKNYLRDNSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVRSLK--SY 422
           V+  P L+++  N   + ++ FF SS+ +++      + +K KC      ++ SL+  ++
Sbjct: 297 VLATPNLVLRLGNKANNKTITFFLSSDFERTQWIDSILSLKQKCNLPGANTINSLEVTAF 356

Query: 423 MI*VQTGV-SQVGFYLL 470
           ++ +Q G+ +++G YL+
Sbjct: 357 IVAMQKGMKTEMGSYLM 373


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,214,909
Number of Sequences: 53049
Number of extensions: 214484
Number of successful extensions: 246
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)