Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1059
         (309 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY437926-1|AAR24077.1|  924|Drosophila melanogaster AMO protein.       27   3.6  
AY283154-1|AAQ18122.1|  924|Drosophila melanogaster polycystin-2...    27   3.6  
AE014134-2193|AAF53183.2|  924|Drosophila melanogaster CG6504-PA...    27   3.6  
BT023818-1|AAZ86739.1|  909|Drosophila melanogaster SD18573p pro...    27   6.2  
AY128427-1|AAM75020.1|  558|Drosophila melanogaster GH23001p pro...    27   6.2  
AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interact...    27   6.2  
AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA...    27   6.2  
AE014297-2923|AAF55843.1|  325|Drosophila melanogaster CG5737-PA...    26   8.2  

>AY437926-1|AAR24077.1|  924|Drosophila melanogaster AMO protein.
          Length = 924

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 262 SQAPDSKERPSRRDPPSLRAWHPLRENGP 176
           S  P + ++PS  D PS  A   +RE GP
Sbjct: 108 SDKPSTSDKPSTSDKPSTSARTTVREPGP 136


>AY283154-1|AAQ18122.1|  924|Drosophila melanogaster polycystin-2
           protein.
          Length = 924

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 262 SQAPDSKERPSRRDPPSLRAWHPLRENGP 176
           S  P + ++PS  D PS  A   +RE GP
Sbjct: 108 SDKPSTSDKPSTSDKPSTSARTTVREPGP 136


>AE014134-2193|AAF53183.2|  924|Drosophila melanogaster CG6504-PA
           protein.
          Length = 924

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 262 SQAPDSKERPSRRDPPSLRAWHPLRENGP 176
           S  P + ++PS  D PS  A   +RE GP
Sbjct: 108 SDKPSTSDKPSTSDKPSTSARTTVREPGP 136


>BT023818-1|AAZ86739.1|  909|Drosophila melanogaster SD18573p
           protein.
          Length = 909

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 242 GASLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSP 108
           G   SPRPS  T    + G    S R+ + +V  ++ +L   T+P
Sbjct: 824 GLFTSPRPSRLTSAQEAAGGNKVSTRSPSRIVQPKRYSLAGATTP 868


>AY128427-1|AAM75020.1|  558|Drosophila melanogaster GH23001p
           protein.
          Length = 558

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 242 GASLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSP 108
           G   SPRPS  T    + G    S R+ + +V  ++ +L   T+P
Sbjct: 473 GLFTSPRPSRLTSAQEAAGGNKVSTRSPSRIVQPKRYSLAGATTP 517


>AM262815-1|CAK18655.1| 1518|Drosophila melanogaster PP1 interacting
            16 protein.
          Length = 1518

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 242  GASLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSP 108
            G   SPRPS  T    + G    S R+ + +V  ++ +L   T+P
Sbjct: 1433 GLFTSPRPSRLTSAQEAAGGNKVSTRSPSRIVQPKRYSLAGATTP 1477


>AE014297-3239|AAO41591.1| 1744|Drosophila melanogaster CG7029-PA
            protein.
          Length = 1744

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 242  GASLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSP 108
            G   SPRPS  T    + G    S R+ + +V  ++ +L   T+P
Sbjct: 1659 GLFTSPRPSRLTSAQEAAGGNKVSTRSPSRIVQPKRYSLAGATTP 1703


>AE014297-2923|AAF55843.1|  325|Drosophila melanogaster CG5737-PA
           protein.
          Length = 325

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -1

Query: 204 PGTLYGKTAPFKTNLDRSRRDEKAEPPEHHISRYRLKQRD 85
           PG ++G T    ++    R D++ E     + +  LKQR+
Sbjct: 116 PGNIFGLTVTQPSSPRAKREDDQVEKTISEVEQQHLKQRE 155


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,334,777
Number of Sequences: 53049
Number of extensions: 256143
Number of successful extensions: 871
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)