Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf1056
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   4.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.7  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   8.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.2  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -3

Query: 60  IIVTISDEYLIIFGFTIIFW 1
           +++   D Y+I++   +IFW
Sbjct: 248 VMLGFQDIYMIVYIIVVIFW 267


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = -3

Query: 60  IIVTISDEYLIIFGFTIIFW 1
           +++   D Y+I++   +IFW
Sbjct: 248 VMLGFQDIYMIVYIIVVIFW 267


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +1

Query: 211 CGNSNFFVCYFLVVSLFTCSFGTLEIKQNYPSLGGCTNI 327
           C   +  VCY+   S F       EI    P+L  CT++
Sbjct: 20  CKAESKVVCYYDSKSHFRQGQAKFEITDLEPALQYCTHL 58


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 666 DCSDTRPRGGGG 631
           D  D RPR GGG
Sbjct: 103 DSEDERPRPGGG 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,920
Number of Sequences: 336
Number of extensions: 4912
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)